EVA results for 1g5c:A

DATE : 2001_04_04
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....
seq	IIKDILRENQDFRFRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVDDGVIRSAAVAIYALGDNEIIIVGHTDCGMARLDEDLIVSRMRELGVEEEVIENFSIDVLNPVGDEEENVIEGVKRLKSSPLIPESIGVHGLIIDINTGRLKPLYLDE
dssp	-HHHHHHHH-------HHH------EEEEEE--HHH--HHHHHH-------EEEEE------HHHHHHHHHHHHHH---EEEEEEE---------HHHHHHHHHH----HHHHHHHHHHH------HHHHHHHHHHHHHH--------EEEEEEE------EEEEE---
jpred	-HHHHHHH--HHHHHH---------EEEEE------HHHHHHHH------EEEEE---------HHHHHHHHHHHH---EEEEEE------------------------HHHHHHHH--------HHHHHHHHHHHHH----------EEEEEEEEE----EEEE----	+2.0	+12.2	+0.10
phd	----------HHHHHHHHH------EEEEEEE-------HHHH--E----EEEEE--------HHHHHHHHHHHHH---EEEEEEE------EE----HHHHHH-----EEEE------------HHHHHHHHHHHHHH------EEEEEEEEEEEEEEEEEEEE----	-2.7	-1.7	+0.07
phdpsi	--HHHHH----HHHHHHHH------EEEEEEE-----HHHHHH-------EEEEE--------HHHHHHHHHHHHH--EEEEEEEE--HHHH---HHHHHHHHHH---HHHHHHH-------HHHHHHHHHHHHHHHHH----HHHEEEEEEEEEEEE--EEEEEE---	+1.1	+10.2	+0.14
prof_king	--HHHHH----HHHHHHH------EEEEEEE--------HHHHH------EEEEEE--------HHHHHHHHHHH---EEEEEEE-------------------H----HHHHHHHH------HHHHHHHHHHHHHHH-----EE---EEEEEEEEE---EEEEEE---	+0.7	+9.8	+0.11
profsec	--HHHHHH---HHHHHHHH------EEEEEE------HHHHHHH------EEEEE--------HHHHHHHHHHHH----EEEEEE----------HHHHHHHHHH----HHHHHH--------HHHHHHHHHHHHHHH--------EEEEEEEEEEE---EEEEEE---	+5.3	+16.4	+0.15
psipred	--HHHHHH---HHHHHHH-------EEEEEE-HH----HHHHHH------EEEE--------HHHHHHHHHHHHHH---EEEEEE---------------HHHHH----HHHHHHH-------HHHHHHHHHHHHHHHHH--------EEEEEEEEE---EEEE-----	+4.9	+15.5	+0.12
pssp	--EEHHHHH---------------EEEEEEE---HHHHHHHHHH-------HHHH----------HHHHHHHHHH-----EEEEE-----------HHHHHHHHH----HHH-EE-EEEEEE------HHHHHHHHHH------------EEEEEE-------------	+11.0	+20.0	+0.14
samt99_sec	-HHHHHHHH--HHHHHHHH------EEEEE-------HHHHHHH------EEEEEEE--E---HHHHHHHHHHHHH---EEEEE-------HHHHH--HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH--------EEEEEEEEE---EEEE-----	-0.7	-2.1	+0.07
sspro1	-HHHHHHH-----HHHHHH------EEEEEE------HHHHHHH------EEEEE---------HHHHHHHHHHHH---EEEEEE----------HHHHHHHHHHH---HHHHH------------HHHHHHHHHHHH-----------EEEEEEE-----EEEEE---	+9.8	+21.5	+0.23

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva