| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,....4....,....5....,....6 |
| seq | ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW | | | |
| dssp | ---------------HHH-------------EE----EEHHHHHHHHHH-----EEE--- | | | |
| jpred | -HHHHHHHHH-------E----EEE-------------HHHHHHHHHHH----------- | -11.2 | -25.7 | -0.17 |
| phd | ---HHHHHH----------------------HHH-----HHHHHHHHHH----------- | -0.1 | -16.4 | -0.08 |
| phdpsi | --HHHHHHH--------EE----E---------------HHHHHHHHH------------ | -7.8 | -22.8 | -0.09 |
| prof1 | --HHHHHHHH---------------------EEEE----HHHHHHHHHH----------- | -6.9 | -22.4 | -0.14 |
| prof_king | -HHHHHHHHH----------------------------HHHHHHHHHHH----------- | -6.0 | -29.8 | -0.17 |
| psipred | --HHHHHHH------HHHH-EEE-------EE-------HHHHHHHHHH----------- | -6.6 | -20.8 | -0.01 |
| pssp | -HHH-HHHHH-----EEEEEHHHHEE-----------HHHHHHHHHH---------EE-- | -10.3 | -17.5 | -0.09 |
| samt99_sec | HHHHHHHHHH-----HHHHHHHHHH------HHHHH-HHHHHHHHHHHH----------- | -21.4 | -17.5 | -0.18 |
| sspro | -HHHHHHHH-------EEEEEEEE------HHHHH--HHHHHHHHHHH-------EE--- | -19.5 | -14.4 | -0.24 |