EVA results for 1f9n:D

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,.
seq	GQRHIKIREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIKELHLVKVPTNNGSYKYSLPADQRFNPLSKLKRALMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLELL
dssp	--HHHHHHHHH---------HHHHHHHH------HHHHHHHHHH---EEE-------EEE--------HHHHHHHHHHHHEEEEEE---EEEEEE----HHHHHHHHHHH----EEEEEE---EEEEEE--HHHHHHHHHHHH---
apssp	-HHHHHHHHHHH------HHHHHHHHHH----EEHHHHHHHHHH--EEEE------EEEEE---------HHHHHHHHHHHHHHH----EEEEEE---HHHHHHHHHHH----HHEEEEE---EEEEEEE----HHHHHHHHHHH-	+6.6	+22.3	+0.11
jpred	--HHHHHHHHHHH-----HHHHHHHHHH----E-E-HHHHHHHH--EEEE------EEEEE--------HHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHHH-----EEEEE----EEEEEE-----HHHHHHHHHH--	+7.7	+19.9	+0.10
phd	--HHHHHHHHHHHH-HHHHHHHHHHHHH----EEEEEHHHHHHHH---EE-----EEEEEE---------HHHHHHHHHHHEEEE----EEEEE---HHHHHHHHHHHHH----EEEEE----EEEEEE-----HHHHHHHHHH--	+9.9	+25.7	+0.17
phdpsi	--HHHHHHHHHHHH---HHHHHHHHHHH-----EHHHHHHHHHHHHHHEE-----EEEEEE--------HHHHHHHHHHHHHHHE---EEEEEE----HHHHHHHHHHH------EEEE----EEEEEE----HHHHHHHHHHH--	+5.5	+19.4	+0.10
profsec	--HHHHHHHHHHH-----HHHHHHHHHH----EEHHHHHHHHHHH--EEE------EEEEE--------HHHHHHHHHHHHHH------EEEEEE---HHHHHHHHHHH-----EEEEE----EEEEEE----HHHHHHHHHHHH-	+7.4	+18.8	+0.14
psipred	-HHHHHHHHHHHH-----HHHHHHHHHH-----HHHHHHHHHHH--EEEE------EEEEE-------HHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHH-----EEEEE----EEEEEE--HHHHHHHHHHHHHH-	+8.9	+17.7	+0.17
sspro2	-HHHHHHHHHHHH-----HHHHHHHHHH---EEE--EHHHHHHHH--EEE-----EEEEEE--------HHHHHHHHHHHHE-------EEEEE----HHHHHHHHHHH-----EEEEE----EEEEEE-----HHHHHHHHHHH-	+1.9	+16.4	+0.02

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva