EVA results for 1f9n:C

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,...
seq	NKGQRHIKIREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIKELHLVKVPTNNGSYKYSLPADQRFNPLSKLKRALMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLELL
dssp	-HHHHHHHHHHHHHH-----HHHHHHHHHH------HHHHHHHHHHH---EEE-----EEE-----------HHHHHHHHHHEEEEEE---EEEEEE----HHHHHHHH-------EEEEEEE--EEEEEE--HHHHHHHHHHHH---
apssp	--HHHHHHHHHHHHH-----HHHHHHHHHH----EEHHHHHHHHHH--EEEE------EEEEE---------HHHHHHHHHHHHHHH----EEEEEE---HHHHHHHHHHH----HHEEEEE---EEEEEEE----HHHHHHHHHHH-	+6.9	+20.7	+0.11
jpred	---HHHHHHHHHHHH-----HHHHHHHHHH----E-E-HHHHHHHH--EEEE------EEEEE--------HHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHHH-----EEEEE----EEEEEE-----HHHHHHHHHH--	+5.9	+18.9	+0.07
phd	---HHHHHHHHHHHHH-HHHHHHHHHHHHH----EEEEHHHHHHHHH---EE-----EEEEEEE--------HHHHHHHHHHHEEEE----EEEEE---HHHHHHHHHHHHH----EEEEE----EEEEEE-----HHHHHHHHHH--	+10.8	+27.3	+0.19
phdpsi	---HHHHHHHHHHHHH----HHHHHHHHHH------HHHHHHHHHHHHHEEE------EEEEE--------HHHHHHHHHHHHHHHE---EEEEEEE---HHHHHHHHHHH-----EEEEE----EEEEEE---HHHHHHHHHHHH--	+9.9	+22.2	+0.19
profsec	--HHHHHHHHHHHHH-----HHHHHHHHHH------HHHHHHHHHHH--EEE------EEEEE--------HHHHHHHHHHHHHEEE----EEEEEE---HHHHHHHHHHH-----EEEEEE---EEEEEE---HHHHHHHHHHHHH-	+12.4	+23.1	+0.26
psipred	-HHHHHHHHHHHHHH-----HHHHHHHHHH-----HHHHHHHHHHH--EEEE------EEEEE-------HHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHH-----EEEEE----EEEEEE--HHHHHHHHHHHHHH-	+7.7	+16.6	+0.15
sspro2	---HHHHHHHHHHHH-----HHHHHHHHHH---EEE--EHHHHHHHH--EEE-----EEEEEE--------HHHHHHHHHHHEEE------EEEEE----HHHHHHHHHHH-----EEEEE----EEEEEE-----HHHHHHHHHHH-	+3.5	+19.5	+0.07

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva