EVA results for 1f5m:A

DATE : 2000_11_15
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,.
seq	STGFHHADHVNYSSNLNKEEILEQLLLSYEGLSDGQVNWVCNLSNASSLIWHAYKSLAVDINWAGFYVTQASEENTLILGPFQGKVACQMIQFGKGVCGTAASTKETQIVPDVNKYPGHIACDGETKSEIVVPIISNDGKTLGVIDIDCLDYEGFDHVDKEFLEKLAKLINKSCVF
dssp	-----HHHHH-------HHHHHHHHHHHHHHHH----EHHHHHHHHHHHHHHHHHH----EEEEEEEEE------EEEEEEEEE-----EEE---HHHHHHHHH---EEE--HHH------------EEEEEEEE-----EEEEEEEEE-------HHHHHHHHHHHHHHHHH-E-
jpred	------EEEEE------HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH----------EEEEEE-----EEEE-------EEEEE-----E-EEEE----EEEEEE-------EE-------EEEEEEE-----EEEEEE----------HHHHHHHHHHHHHHHHH---	-0.9	+5.8	+0.03
phd	----EEEE---------HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-----HHHHHH-EEE----EEEE-----EEEEEEEE----EEHHHH------EEEE----------------EEEEEEE----EEEEEEEE---------HHHHHHHHHHHHHHHHH---	+3.6	+12.9	+0.11
phdpsi	-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----EEEEEEEE-----EEEEEE-----EEEEE-----EEEEEE----EEEEEE-------EEE------EEEEEEE----EEEEEEEE---------HHHHHHHHHHHHHHHHH---	+1.0	-1.9	+0.06
prof_king	-----------------HHHHHHHHHHHHHHHH------EE-HHHHHHHHHHHH----EEE-EEEEEEEE-----EEEE-------EEEEEE----E--EEEE---EEEEEE-------EEE-----EEEEEEEEE---EEEEEEE----------HHHHHHHHHHHHHHHHH---	-1.6	+1.0	+0.05
profsec	--------EEEE-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---EEEEEEEE-----EEEEE------EEEEEE----EEEEEEE---EEEEEE-------EEE------EEEEEEEE---EEEEEEEE---------HHHHHHHHHHHHHHHHH---	-4.1	-5.4	-0.03
psipred	-------HHHH------HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-----EEEEEEEE-----EEEEEEE---EEEEEE-----EEHHHHH---EEEE--------EEE--HHHH--EEEEEEE---EEEEEEE----------HHHHHHHHHHHHHHHHH---	+1.1	+8.4	+0.04
pssp	---EEEEE----------HHHHHHHHHH--------EEEEEEE----HHHHHHHHHHHHHHHH--EEEEE------EEEE------HHHHH-----EEE------EEEEEE------EEEEE-----EEEEEEEEE-----EEEEEE-----------HHHHHHHHHHHHH--HH-	-4.9	+7.7	-0.04
sspro1	-----------------HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-----H-HHEEEEEE-----EEEE------EEEEEEE----EEE-E-----EEEEEE-------EE-------EEEEEEEE---EEEEEEEE---------HHHHHHHHHHHHHHHHH---	-1.5	+2.0	+0.01

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva