EVA results for 1f3y:A

DATE : 2001_06_06
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,
seq	GPLGSMDSPPEGYRRNVGICLMNNDKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAPHL
dssp	---------------EEEEEEE-----EEEEEE--EEEEEE--EEE------HHHHHHHHHHHHH----EEEEEE-----E----HHHHHHHHHH--------EEEEEEEEE---HHH------------EEEEEEE-HHHHHHHE-HHHHHHHHHHHHHHHHH-
jpred	----------------EEEEEE-----EEEEEE-------------------HHHHHHHHHHHH-----HHHHH-----EEE------EEEE-------------EEEEEEE-----EEE--------------EE---HHHHHHHHHH-HHHHHHHHHHH----	-3.2	-2.9	-0.04
phd	----------------EEEEEE----EEEEEEE-------------------HHHHHHHHHHHH------EEEEE---EEEEE--HHH---------------HHHEEE-EE-----EEE-------------EEEEEEE--HHHHHHHHHHHHHHHHHHHHH--	+2.2	+3.4	+0.07
phdpsi	----------------EEEEEE----EEEEEEE------EE-----------HHHHHHHHHHHH----HHHHHHH--EEEEE----HHHHHHHHHH---------EEEEEEEE-----EE---------------E--HHHHHHHHHHHHHHHHHHHHHHHHH--	+1.8	+7.7	+0.09
profsec	---------------EEEEEEE----EEEEEEE-----EEE-----------HHHHHHHHHHHH----HHHHHHH--EEEEE----HHHHHEEE-----------EEEEEEEE----EEE-------------EEEE-HHHHHHHHHHHHHHHHHHHHHHHHH--	+0.6	+7.2	+0.01
psipred	---------------EEEEEEE----EEEEEEE------EE-----------HHHHHHHHHHHH-----EEEEEEE--EEE----HHHHHEEEE-----------EEEEEEE------------------HH--EE--HHHHHHHH-----HHHHHHHHHHH---	+3.1	+10.4	+0.07
pssp	--EEE-----------EEEEE----HHHH-------------------------HHHHHHHHH------HHH-----EEEEE----HHHHEE-EE-----HHHHHHEEEEE------HHEEE---------EEEEE---HHHHHHH------HHEEEEEEHH---	-6.4	-1.6	-0.06
samt99_sec	--------------EEEEEEEE----EEEEEEE------EE-----------HHHHHHHHHHHHH------EEEEEEEE-------HHHHHHHE--------EEEEEEEEE---------------------HEEEE-HHHHHHHHH---HHHHHHHHHHHHHH-	+4.7	+12.3	+0.13

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva