EVA results for 1f2u:A

DATE : 2000_08_02
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....
seq	MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILES
dssp	-EEEEEEEEEE--EEEEEEE---EEEEEEE-----HHHHHHHHHHHHH---------HHHHE-----EEEEEEEEEE--EEEEEEEEEE-------EEEEEEEE--EEEE-----HHHHHHHHHHH--HHHHHHH-EE------HHH--
jpred	---EEEEEE--------EE-----EEEEEE------HHHHHHHHHHHH-----------EEEE------EEEEEEE-----EEE--EEEE----------EEE-----EE------HHHHHHHHHHH-------EEEE---HHHHH---	-4.7	+2.2	0.00
phd	--EEEEEE----HHHHH--------EEEEE-----HHHHHHHHHHHH---------------------EEEEEEEE------EEE--------EEEE---EEE-------E------HHHHHHHHHHH-------EE-E--HHHHHH--	-10.7	-8.4	-0.03
phdpsi	--EEEEEEE-------EEEEE---EEEEE------HHHHHHHHHHHHH---------HHHHHH-----EEEEEEEE-----EEEEEHHH--------EEEEEE-----E-E-----HHHHHHHHHHH------EEEEEE---HHHHH--	+0.6	+12.8	+0.07
prof1	--EEEEEEEEEEEE--EEEEE---EEEEE------HHHHHHHHHHHH----------HHHEEE-----EEEEEEEE----EEEEEEEEEE-----EEEEEEEEE----EEEE---HHHHHHHHHHHH-------EEEEE--HHHHHH--	+0.9	+7.9	+0.05
prof_king	--EEEEEEEEEE---EEEEE----EEEEEE-----HHHHHHHHHHH------------EEEEEE---EEEEEEEEEE---EEEEEEEEE------EEEEEEEE----EEEEEE-----HHHHHHHHHH----EEEEEEE---HHHHH--	+1.4	+14.8	+0.04
psipred	-EEEEEEEEEEEEEEEEEEE----EEEEE------HHHHHHHHHHHH---------HHHHHHH-----EEEEEEEEE---EEEEEEEEE-------EEEEEEE-----EEEE----HHHHHHHHHHH-------EEEEE--HHHHHHH-	+3.2	+9.4	+0.08
pssp	----EEEEEE-EE--EEEEEEE--EEEEEE--------HHHHHHH-------HHH----EEEE-------EEEEE------EEEEEEEE-----HHHHHHHHHHH---EEEE----HHHHHHHHHHH--------EE---HH-HHHHH-	-5.2	+5.0	-0.02
samt99_sec	--EEEEEEE-EEEE--EEEEE---EEEEE------HHHHHHHHHHH-------EE-----EE------EEEEEEEE-----EEEEEEEE------HEEHHEEH-------HHH--HHHHHHHHHHH---------EE----HHHHHHH-	-7.3	-6.6	-0.06
sspro	--EEEEEEE-------EEEE----EEEEE------HHHHHHHHHHHH------------HHH------EEEEEEEE----EEEEEEEEEE------EEEEEEE------EE----HHHHHHHHHHHH-HHHHHHEEE----HHHHHHH-	+4.3	+18.2	+0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : abbreviation of prediction method (seq=sequence)
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 30, 2001
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva