| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,....4....,. |
| seq | ASCWAQSQGYNCCNNPSSTKVEYTDASGQWGVQNGQWCGIDYSYGQ | | | |
| dssp | ---HHHH---EE---HHH--EEEEE--EEEEEE--EEEEE------ | | | |
| apssp | ------------------EEEEEE------EEE----EE------- | -6.1 | -11.0 | -0.05 |
| jpred | ------------------EEEEEE------EE-------------- | -19.7 | -36.8 | -0.22 |
| phd | ---EE-----EE-------EEEEE-----EEEE----EEEEE-E-- | -6.1 | -7.7 | -0.09 |
| phdpsi | --EEE----EEE------EEEEEE-------EE----EEE------ | -13.0 | -7.0 | -0.18 |
| prof_king | -HHHHHH-----------EEEEEE---------------------- | -19.8 | -37.3 | -0.14 |
| profsec | --EEE----EEE-------EEEEEE----EEEE---EEEE------ | -4.7 | +2.6 | -0.06 |
| psipred | --HHHHHH-----------EEEEE---------------------- | -19.6 | -34.4 | -0.16 |
| pssp | -EEE------EEE------EEEEE----------EEEEEEEE---- | -8.7 | -7.1 | -0.09 |
| samt99_sec | ---HHHHH-----------EEEEE-----EEE----EEEE------ | -2.1 | -1.6 | +0.02 |
| sspro2 | 1.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.00 | +2.4 | +2.8 | +0.09 |