# RDB file with all secondary structure prediction methods # NOTE: the numbers for each month are NOT NOT NOT comparable # between the methods, since they base on different protein sets!! month method nprot average Q3 2001_04 apssp2 1 56.4 2003_11 apssp2 22 74.3 2003_12 apssp2 19 75.7 2004_01 apssp2 12 71.2 2004_02 apssp2 19 74.6 2004_03 apssp2 13 76.6 2004_04 apssp2 4 77.7 2001_04 jpred 1 84.5 2003_11 jufo 18 68.6 2003_12 jufo 16 68.9 2004_01 jufo 12 62.2 2004_02 jufo 18 68.8 2004_03 jufo 6 71.1 2003_07 jufo 4 76.8 2003_08 jufo 5 64.3 2001_04 phd 1 75.5 2003_11 phd 22 74.5 2003_12 phd 19 72.8 2004_01 phd 11 73.2 2004_02 phd 19 72.3 2004_03 phd 12 73.5 2003_07 phd 5 76.7 2003_08 phd 5 60.4 2001_04 phdpsi 1 82.7 2003_11 phdpsi 22 74.4 2003_12 phdpsi 18 73.7 2004_01 phdpsi 11 72.5 2004_02 phdpsi 19 72.3 2004_03 phdpsi 12 73.5 2003_07 phdpsi 5 76.7 2003_08 phdpsi 5 64.5 2001_04 prof_king 1 80.9 2003_11 prof_king 16 71.5 2003_12 prof_king 19 72.0 2004_01 prof_king 12 65.7 2004_02 prof_king 18 68.2 2004_03 prof_king 13 73.0 2004_04 prof_king 4 76.8 2003_07 prof_king 5 76.4 2003_08 prof_king 5 72.3 2001_04 profsec 1 80.9 2003_11 profsec 22 74.8 2003_12 profsec 19 75.2 2004_01 profsec 11 73.8 2004_02 profsec 19 76.2 2004_03 profsec 12 77.1 2003_07 profsec 5 83.0 2003_08 profsec 5 64.2 2001_04 prospect 1 70.9 2003_11 prospect 10 67.8 2003_12 prospect 15 71.3 2004_01 prospect 10 74.1 2004_02 prospect 18 64.1 2004_03 prospect 8 66.8 2004_04 prospect 4 77.4 2003_07 prospect 3 85.6 2003_08 prospect 4 78.1 2001_04 psipred 1 70.9 2003_11 psipred 8 69.3 2003_12 psipred 19 79.0 2004_01 psipred 12 71.2 2004_02 psipred 19 81.1 2004_03 psipred 13 79.5 2004_04 psipred 4 77.3 2003_07 psipred 5 82.2 2003_08 psipred 5 74.7 2001_04 pssp 1 56.4 2003_11 sable 15 75.1 2003_12 sable 19 78.0 2004_01 sable 12 68.0 2004_02 sable 19 75.1 2004_03 sable 13 76.4 2004_04 sable 4 79.0 2003_07 sable 7 82.6 2003_08 sable 5 77.6 2004_02 sable2 15 77.8 2004_03 sable2 13 74.6 2004_04 sable2 4 81.2 2001_04 samt99_sec 1 78.2 2003_11 samt99_sec 22 76.1 2003_12 samt99_sec 18 79.8 2004_01 samt99_sec 12 74.7 2004_02 samt99_sec 19 76.1 2004_03 samt99_sec 13 77.7 2004_04 samt99_sec 4 83.5 2003_07 samt99_sec 5 81.8 2003_08 samt99_sec 5 78.0 2003_11 scratch 22 76.8 2003_12 scratch 13 75.7 2004_01 scratch 11 70.0 2004_02 scratch 19 77.4 2004_03 scratch 13 75.5 2004_04 scratch 4 80.2 2003_07 scratch 5 82.9 2003_08 scratch 5 77.0 2001_04 sspro1 1 79.1 2001_04 sspro2 1 79.1 2004_02 sspro4 4 80.8 2004_03 sspro4 13 75.3 2004_04 sspro4 4 84.1 2004_01 yaspin 7 70.7 2004_02 yaspin 19 60.9 2004_03 yaspin 13 71.0 2004_04 yaspin 4 72.2