All secondary structure prediction methods


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MethodNumber of
proteins
Average ModZscore
for all proteins
Comments
APSSPno longer tested
APSSP2366 74.9 
asspno longer tested
JNetno longer tested
JPred167 72.8 
JUFO133 68.9 
PHD373 71.5 
PHDpsi370 72.8 
PROFno longer tested
PROF_king375 72.5 
PROFsec373 75.0 
Prospect286 71.4 
PSIpred374 75.9 
PSSP56.4 
SABLE87 75.8 
SABLE230 77.0 
samt99_sec#no longer tested
SAM-T99sec329 75.5 
SCRATCH (SSpro3)168 75.6 
ssprono longer tested
SSpro179.1 
SSpro2257 74.3 
SSpro419 78.0 
yaspin40 66.5 

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