Home - Secondary structure Comparative modelling Contacts Threading - search - FTP - Mirrors - Bottom
EVA summary for category sec (Pairwise)
- table entries are mean differences between servers
- [...] contain sample size
- green color indicates the difference between two servers is significant
- pink color indicates the difference between two servers is not significant
- significance level is 0.95 of Student t-distribution
Analysis of Q3 score for Secondary Structure Prediction:
Ranking of the methods:
1. profsec
2. psipred
3. samt99_sec
4. sspro1
5. sspro2
6. apssp2
7. prof_king
8. jpred
9. phdpsi
10. prospect
11. phd
12. apssp
13. pssp
t-Student statistical analysis of the comparisons:
| profsec | psipred | samt99_sec | sspro1 | sspro2 | apssp2 | prof_king | jpred | phdpsi | prospect | phd | apssp | pssp |
1. profsec | | -0.31 ± 7.96 [ 164] | 0.85 ± 7.78 [ 104] | < 2 models common | 1.11 ± 7.32 [ 167] | 1.05 ± 7.19 [ 144] | 1.88 ± 6.31 [ 125] | 3.10 ± 7.79 [ 129] | 2.69 ± 5.69 [ 167] | 3.16 ± 7.98 [ 86] | 5.32 ± 7.91 [ 168] | 6.91 ± 9.97 [ 167] | < 2 models common | 2. psipred | 0.31 ± 7.96 [ 164] | | 0.23 ± 8.20 [ 139] | < 2 models common | 1.45 ± 7.41 [ 209] | 1.09 ± 3.96 [ 185] | 2.58 ± 7.55 [ 164] | 2.95 ± 7.68 [ 151] | 3.08 ± 8.87 [ 163] | 3.13 ± 9.22 [ 117] | 5.74 ± 10.42 [ 164] | 7.37 ± 10.47 [ 205] | < 2 models common | 3. samt99_sec | -0.85 ± 7.78 [ 104] | -0.23 ± 8.20 [ 139] | | < 2 models common | 1.06 ± 8.04 [ 149] | 0.26 ± 7.62 [ 131] | 1.25 ± 7.67 [ 113] | 2.04 ± 7.87 [ 108] | 1.65 ± 8.42 [ 103] | 3.78 ± 8.81 [ 80] | 4.66 ± 10.96 [ 104] | 6.66 ± 10.71 [ 145] | < 2 models common | 4. sspro1 | < 2 models common | < 2 models common | < 2 models common | | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | 5. sspro2 | -1.11 ± 7.32 [ 167] | -1.45 ± 7.41 [ 209] | -1.06 ± 8.04 [ 149] | < 2 models common | | -0.12 ± 6.40 [ 204] | 0.86 ± 6.99 [ 177] | 1.74 ± 7.35 [ 166] | 1.65 ± 7.71 [ 166] | 2.13 ± 9.19 [ 130] | 4.13 ± 9.41 [ 167] | 5.98 ± 9.61 [ 224] | < 2 models common | 6. apssp2 | -1.05 ± 7.19 [ 144] | -1.09 ± 3.96 [ 185] | -0.26 ± 7.62 [ 131] | < 2 models common | 0.12 ± 6.40 [ 204] | | 1.06 ± 7.68 [ 164] | 1.85 ± 6.86 [ 144] | 1.92 ± 8.70 [ 143] | 2.40 ± 9.83 [ 129] | 4.01 ± 10.02 [ 144] | 6.21 ± 9.09 [ 201] | < 2 models common | 7. prof_king | -1.88 ± 6.31 [ 125] | -2.58 ± 7.55 [ 164] | -1.25 ± 7.67 [ 113] | < 2 models common | -0.86 ± 6.99 [ 177] | -1.06 ± 7.68 [ 164] | | 0.56 ± 7.08 [ 123] | 0.96 ± 7.55 [ 124] | 0.50 ± 8.95 [ 116] | 3.28 ± 8.39 [ 125] | 5.68 ± 9.16 [ 172] | < 2 models common | 8. jpred | -3.10 ± 7.79 [ 129] | -2.95 ± 7.68 [ 151] | -2.04 ± 7.87 [ 108] | < 2 models common | -1.74 ± 7.35 [ 166] | -1.85 ± 6.86 [ 144] | -0.56 ± 7.08 [ 123] | | -0.81 ± 8.05 [ 128] | 1.77 ± 9.86 [ 88] | 2.68 ± 9.89 [ 129] | 4.29 ± 8.18 [ 165] | < 2 models common | 9. phdpsi | -2.69 ± 5.69 [ 167] | -3.08 ± 8.87 [ 163] | -1.65 ± 8.42 [ 103] | < 2 models common | -1.65 ± 7.71 [ 166] | -1.92 ± 8.70 [ 143] | -0.96 ± 7.55 [ 124] | 0.81 ± 8.05 [ 128] | | 0.31 ± 9.08 [ 85] | 2.65 ± 7.10 [ 167] | 4.18 ± 9.94 [ 166] | < 2 models common | 10. prospect | -3.16 ± 7.98 [ 86] | -3.13 ± 9.22 [ 117] | -3.78 ± 8.81 [ 80] | < 2 models common | -2.13 ± 9.19 [ 130] | -2.40 ± 9.83 [ 129] | -0.50 ± 8.95 [ 116] | -1.77 ± 9.86 [ 88] | -0.31 ± 9.08 [ 85] | | 1.64 ± 10.85 [ 86] | 4.05 ± 11.82 [ 125] | < 2 models common | 11. phd | -5.32 ± 7.91 [ 168] | -5.74 ± 10.42 [ 164] | -4.66 ± 10.96 [ 104] | < 2 models common | -4.13 ± 9.41 [ 167] | -4.01 ± 10.02 [ 144] | -3.28 ± 8.39 [ 125] | -2.68 ± 9.89 [ 129] | -2.65 ± 7.10 [ 167] | -1.64 ± 10.85 [ 86] | | 1.71 ± 9.92 [ 167] | < 2 models common | 12. apssp | -6.91 ± 9.97 [ 167] | -7.37 ± 10.47 [ 205] | -6.66 ± 10.71 [ 145] | < 2 models common | -5.98 ± 9.61 [ 224] | -6.21 ± 9.09 [ 201] | -5.68 ± 9.16 [ 172] | -4.29 ± 8.18 [ 165] | -4.18 ± 9.94 [ 166] | -4.05 ± 11.82 [ 125] | -1.71 ± 9.92 [ 167] | | < 2 models common | 13. pssp | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | |
Analysis of sov score for Secondary Structure Prediction:
Ranking of the methods:
1. profsec
2. sspro1
3. psipred
4. samt99_sec
5. prof_king
6. apssp2
7. sspro2
8. jpred
9. phdpsi
10. prospect
11. phd
12. apssp
13. pssp
t-Student statistical analysis of the comparisons:
| profsec | sspro1 | psipred | samt99_sec | prof_king | apssp2 | sspro2 | jpred | phdpsi | prospect | phd | apssp | pssp |
1. profsec | | < 2 models common | -0.61 ± 12.22 [ 164] | 2.26 ± 11.69 [ 104] | 1.87 ± 10.53 [ 125] | 2.18 ± 12.44 [ 144] | 2.30 ± 11.63 [ 167] | 3.43 ± 10.66 [ 129] | 3.68 ± 8.75 [ 167] | 3.89 ± 13.55 [ 86] | 5.94 ± 11.65 [ 168] | 9.00 ± 14.62 [ 167] | < 2 models common | 2. sspro1 | < 2 models common | | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | 3. psipred | 0.61 ± 12.22 [ 164] | < 2 models common | | 1.81 ± 11.76 [ 139] | 3.35 ± 10.95 [ 164] | 1.94 ± 8.62 [ 185] | 3.36 ± 11.52 [ 209] | 3.58 ± 11.04 [ 151] | 4.50 ± 13.05 [ 163] | 4.02 ± 13.09 [ 117] | 6.78 ± 14.71 [ 164] | 9.92 ± 13.91 [ 205] | < 2 models common | 4. samt99_sec | -2.26 ± 11.69 [ 104] | < 2 models common | -1.81 ± 11.76 [ 139] | | 0.00 ± 12.49 [ 113] | 0.03 ± 12.84 [ 131] | 1.54 ± 11.97 [ 149] | 1.55 ± 10.64 [ 108] | 1.45 ± 11.46 [ 103] | 2.99 ± 14.45 [ 80] | 3.96 ± 13.35 [ 104] | 7.04 ± 14.43 [ 145] | < 2 models common | 5. prof_king | -1.87 ± 10.53 [ 125] | < 2 models common | -3.35 ± 10.95 [ 164] | -0.00 ± 12.49 [ 113] | | -0.91 ± 11.18 [ 164] | 0.27 ± 11.71 [ 177] | 0.66 ± 11.46 [ 123] | 1.91 ± 11.67 [ 124] | -0.03 ± 12.04 [ 116] | 4.42 ± 12.47 [ 125] | 7.74 ± 12.94 [ 172] | < 2 models common | 6. apssp2 | -2.18 ± 12.44 [ 144] | < 2 models common | -1.94 ± 8.62 [ 185] | -0.03 ± 12.84 [ 131] | 0.91 ± 11.18 [ 164] | | 0.66 ± 12.35 [ 204] | 1.22 ± 10.63 [ 144] | 1.79 ± 14.54 [ 143] | 2.17 ± 13.38 [ 129] | 3.93 ± 16.11 [ 144] | 7.14 ± 13.73 [ 201] | < 2 models common | 7. sspro2 | -2.30 ± 11.63 [ 167] | < 2 models common | -3.36 ± 11.52 [ 209] | -1.54 ± 11.97 [ 149] | -0.27 ± 11.71 [ 177] | -0.66 ± 12.35 [ 204] | | 0.30 ± 11.91 [ 166] | 1.42 ± 13.04 [ 166] | 0.89 ± 14.54 [ 130] | 3.50 ± 14.32 [ 167] | 6.37 ± 14.12 [ 224] | < 2 models common | 8. jpred | -3.43 ± 10.66 [ 129] | < 2 models common | -3.58 ± 11.04 [ 151] | -1.55 ± 10.64 [ 108] | -0.66 ± 11.46 [ 123] | -1.22 ± 10.63 [ 144] | -0.30 ± 11.91 [ 166] | | -0.05 ± 11.37 [ 128] | 1.87 ± 14.44 [ 88] | 2.98 ± 13.90 [ 129] | 5.51 ± 12.88 [ 165] | < 2 models common | 9. phdpsi | -3.68 ± 8.75 [ 167] | < 2 models common | -4.50 ± 13.05 [ 163] | -1.45 ± 11.46 [ 103] | -1.91 ± 11.67 [ 124] | -1.79 ± 14.54 [ 143] | -1.42 ± 13.04 [ 166] | 0.05 ± 11.37 [ 128] | | -0.26 ± 15.16 [ 85] | 2.24 ± 9.30 [ 167] | 5.32 ± 13.85 [ 166] | < 2 models common | 10. prospect | -3.89 ± 13.55 [ 86] | < 2 models common | -4.02 ± 13.09 [ 117] | -2.99 ± 14.45 [ 80] | 0.03 ± 12.04 [ 116] | -2.17 ± 13.38 [ 129] | -0.89 ± 14.54 [ 130] | -1.87 ± 14.44 [ 88] | 0.26 ± 15.16 [ 85] | | 2.41 ± 16.95 [ 86] | 6.09 ± 16.02 [ 125] | < 2 models common | 11. phd | -5.94 ± 11.65 [ 168] | < 2 models common | -6.78 ± 14.71 [ 164] | -3.96 ± 13.35 [ 104] | -4.42 ± 12.47 [ 125] | -3.93 ± 16.11 [ 144] | -3.50 ± 14.32 [ 167] | -2.98 ± 13.90 [ 129] | -2.24 ± 9.30 [ 167] | -2.41 ± 16.95 [ 86] | | 3.21 ± 12.73 [ 167] | < 2 models common | 12. apssp | -9.00 ± 14.62 [ 167] | < 2 models common | -9.92 ± 13.91 [ 205] | -7.04 ± 14.43 [ 145] | -7.74 ± 12.94 [ 172] | -7.14 ± 13.73 [ 201] | -6.37 ± 14.12 [ 224] | -5.51 ± 12.88 [ 165] | -5.32 ± 13.85 [ 166] | -6.09 ± 16.02 [ 125] | -3.21 ± 12.73 [ 167] | | < 2 models common | 13. pssp | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | < 2 models common | |
Home - Secondary structure Comparative modelling Contacts Threading - search - FTP - Mirrors - Top