EVA results for 1lsl:A

DATE : 2002_12_18
TYPE : sec
NRES : 113
HEADER : CELL ADHESION
COMPND : 2 MOLECULE: THROMBOSPONDIN 1;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : K.TAN, M.DUQUETTE, J.LIU, Y.DONG, R.ZHANG, A.JOACHIMIAK, J.LAWLER,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11..
seq	QDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARETKACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQICNKQDC
dssp	-------------------EEEEEEE-------------------EEEEEEE-----E-------------------EEEEEE--------E----------EEEEEE-----
apssp2	---------------E-----EEEEEEEE-------------------------------------------------EEEEEEEE---------------------------	+3.1	-21.3	-0.25
phd	---------------------------------------------------------------------------------EE------------------------------	+6.7	-37.5	-0.12
phdpsi	---------------------------------------------------------------------------------EE------------------------------	+4.1	-39.8	-0.15
prof_king	----------------EE----EEEEEEE--------------------------------------------------EEEEEE----------------------------	+2.7	-23.5	-0.25
profsec	----------------------EEEEEEEE-------------------------------------------------EEE-EEEE-------------------EE-----	+0.8	-13.2	-0.29
prospect	-----------------------EEEEE--------------------------------------------------EEEEEEE-----------------HHHH-------	+6.8	-7.9	-0.10
psipred	----------------------EEEEEEE-------------------------------------------------EEEEEEEE---------------------------	+2.2	-20.1	-0.27
samt99_sec	----------------------EEEEEEE-------------------------------------------------EEEEEEEE-------------------EE------	+4.7	-8.0	-0.20
sspro2	---------------------EEEEEEEE-------------------------------------------------EEEEEEE------------------EEE-------	+7.8	-5.1	-0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Dec 25, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva