EVA results for 1md0:A

DATE : 2002_12_11
TYPE : sec
NRES : 138
HEADER : TRANSCRIPTION
COMPND : 2 MOLECULE: C-ETS-1 PROTEIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
AUTHOR : C.W.GARVIE, M.A.PUFALL, B.J.GRAVES, C.WOLBERGER

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,...
seq	PKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKP
dssp	----HHHHHHHHH----------HHHHHHHH------HHHHHHHHH--HHH----EE-----EEE---HHHHHHHHHHHH------HHHHHHHHHHHHH---EEE------EEEE---HHHHH---HHHHHHH-----
apssp	-----------------------HHHH--------HHHHHHHHHHHH-----EEEEEE----EEEE---HHHHHHHHH--------HHHHHHHHHHHH---EEEEE---EEEEEEE----------HHHHHHHH----	-36.6	-35.1	-0.31
apssp2	----HHHHE--------------------------EEHHHHHHHHH--------EEEE----EEEE---HHHHHHHHHH-------HHHHHHHHHHHHH--EEEE----HHHEHHHH-HHHHH----HHHHHHH----	+1.4	+6.5	0.00
phd	-----------------------------------HHHHHHHHHHHH------EEEEE----EEEE--HHHHHHHHHH--------HHHHHHHHHHHHHHEEEEE---EEEEEEE----HHH----------------	-1.8	-7.7	+0.07
prof_king	-----------------------------------HHHHHHHHHHH------EEEEEE---EEEEE---HHHHHHHHH--------HHHHHHHHHHHH----EEE----EEEEEEE--HHHHH----HHHHH------	0.0	+0.1	+0.11
profsec	-----HHHH-------------------------HHHHHHHHHHHH-------EEEEE----EEEEE-HHHHHHHH----------HHHHHHHHHHHHH--EEEEE---EEEEEEEE-HHHH-----HHHHHHH----	-1.8	+1.7	+0.05
prospect	------------------------------------HHHHHHHHHH-------EEEEE----EEEE--HHHHHHHHHHH-------HHHHHHHHHHHHH---EEEE---EEEEEHHHHHHHHH---------------	-0.7	-8.9	+0.05
psipred	-------------------------------------HHHHHHHHH--------EEEE----EEEE--HHHHHHHHHHH-------HHHHHHHHHHHHH----------EEEEEEE---HHH----HHHHHHHH----	+0.5	-6.5	+0.05
sspro2	------------------------------------HHHHHHHHHH-------EEEEE----EEEE--HHHHHHHHHHH-------HHHHHHHHHHHHH---EEE----EEEEEEE--HHHH----HHHH-HH-----	+3.2	+0.5	+0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Dec 18, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva