EVA results for 1lrr:A

DATE : 2002_12_11
TYPE : sec
NRES : 118
HEADER : REPLICATION INHIBITOR/DNA
COMPND : 2 MOLECULE: SEQA PROTEIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
AUTHOR : A.GUARNE, Q.ZHAO, R.GUIRLANDO, W.YANG

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,...
seq	TIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGTI
dssp	-HHHHHHHHHHHHH-HHHHH---HHHHHHHHHHHHHHH-HHHHHHHHH--E----E-EE--HHHHHHH------EE------EE-----HHHHHHHHHHHHHH----HHHHHHHH---
apssp	HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH----EEEEEHHHHHHHH--------------EEEEE------HHHHHHHHHHHHH-HHHHHHHH----	-36.6	-35.1	-0.31
apssp2	HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH---EEEEEE--HHHHHH--------------EEEEE-----HHHHHHHHHHHHH---HHHHHHHH---	+6.7	-3.7	+0.08
phd	-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH---EEEEE--HHHHHHHH-------------EEEEE----HHHHHHHHHHHHH----HHHHHHHH---	+15.6	+13.8	+0.27
phdpsi	-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH---EEEEE--HHHHHHHH-------------EEEEE----HHHHHHHHHHHHH----HHHHHHHH---	+13.0	+11.5	+0.24
prof_king	-HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH----EEEEE--HHHHHH--------------EEEEE-----HHHHHHHHHHHHH---HHHHHHH----	+9.0	+10.8	+0.12
profsec	-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH---EEEEEE--HHHHHHH-------------EEEEE----HHHHHHHHHHHHH----HHHHHHHHH--	+8.8	+6.9	+0.13
prospect	-HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-----EEEEE-----HHHH--------------EEEEE------HHHHHHHHHHH----HHHHHHHH---	+8.7	+8.6	+0.13
psipred	-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH----EEEEEE--HHHHHH--------------EEEEE----HHHHHHHHHHHHHH---HHHHHHHH---	+8.3	-3.4	+0.12
sspro2	HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH----EEEE-HHHHHHHH--------------EEEEE-----HHHHHHHHHHHH----HHHHHHH----	+6.2	+7.7	+0.05

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Dec 18, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva