EVA results for 1miu:A

DATE : 2002_09_25
TYPE : sec
NRES : 671
HEADER : GENE REGULATION/ANTITUMOR PROTEIN
COMPND : 2 MOLECULE: DELETED IN SPLIT HAND/SPLIT FOOT PROTEIN 1;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : H.YANG, P.D.JEFFREY, J.MILLER, E.KINNUCAN, Y.SUN, N.H.THOMA,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,....46...,....47...,....48...,....49...,....50...,....51...,....52...,....53...,....54...,....55...,....56...,....57...,....58...,....59...,....60...,....61...,....62...,....63...,....64...,....65...,....66...,....67
seq	KDLMSSLQSARDLQDMRIKNKERRHLRLQPGSLYLTKSSTLPRISLQAAVGDRAPSACSPKQLYIYGVSKECINVNSKNAEYFQFDIQDHFGKEDLCAGKGFQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISSIWVANHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSRRSALKKILERDDTAAKTLVLCISDIVDTIELTDGWYAVRAQLDPPLMALVKSGKLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSRLGFFRDPRPFPLPLSSLFSDGGNVGCVDIIVQRVYPLQWVEKTVSGLYIFRSEREEEKEALRFAEAQQKKLEALFTKVHTEFKSRTLTRQQVHALQDGAELYAAVQYASDPDHLEACFSEEQLRALNNYRQMLNDKKQARIQSEFRKALESAEKEEGLSRDVTTVWKLRVTSYKKKEKSALLSIWRPSSDLSSLLTEGKRYRIYHLAVSKSKSKFERPSIQLTATKRTQYQQLPVSSETLLQVYQPRESLHFSRLSDPAFQPPCSEVDVVGVVVSVVKPIGLAPLVYLSDECLNLLVVKFGIDLNEDIKPRVLIAASNLQCQPESTSGVPTLFAGHFSIFSASPKEAYFQEKVNNLKHAIENIDTFYKEAEKKLIHVLE
dssp	-----HHHHHHHHHHHHHHHHH---------HHHHHH------EE--HHH-------------------------------------HHHH----------EE-----EE---------HHHHHHHHHH----------HHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHH-------HHHHHH------E--EE-EE--------EE----EE-----HHHHHHHH--------E-----E-EE---------------EE---HHH---E------EE----------HHH-------EEEEEEEEEEE---E--EE-----EE-----HHHHHHHHHHHH---HHHHHHHHHH---------HHHHH----HHHHHHHHH------------------------HHHHHHHHHHHHHHHHH-HHHH---------E--EEEEEEEE-------EEEEEE---HHHHHH-----EEEEEEE--------------EEEEEEEEEEEEE---HHHH--------E---HHHH---------EEEEEEEEEEEE-------EEEEE-----EEEEEE------------EEEEEEEE-----------EEE----EEE--------HHHHHHH-HHHH----HHHHHHHHHHHHH-
apssp	---HHHHHHHHHHHHHHHHHHHHHEEE-----EEEE-------HHHHHHH-----------EEEEEE--EEE-EE-------EEEE-------HHHHH----EE----EEE--------HHHHHH-----------HHHHHEHH--HHHHHHHH-HHHH---HHHHHH---HHHHHHHHH----EE-----HHHHHHHHH----HHHHHEEEE-----EEEE---HHHHHH-----HHHHHH---EE--HHHHHH--EE---------------EEEEEE------HHHH--------------------------EEEEEEEEEE--EE-EEEE--EEEEEE--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH--HHHHHHHHH-----HHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHH-------EEEEEEEEEEE-----HHEEEEE-----HHHHHH----EEEEEEEE-----------EEEE----EE-EE-------EEEEE----------------------EEEEEEEEEEEE-----EEEEE------EEEEEEE---------EEEEE----------------EEE--EEEE-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--	-9.8	-22.0	-0.18
apssp2	---HHHHHHHHHHHHHHHH-HHHHEE------EEEE-------EEEEHH------------EEEEE---HHHH---------EEEEHHHH---HHH-----EEE----EEEE------HHHHHHHHHH--------HHHHHEHHHHHHHHHHHHHHHHHH--HHH------HHHHHHHHHHHHHHHHH----HHHHHHHH-------EEEEEE-----EEEEE--EEEEEEE---HHHHHHH-------HHHHHH--HH---------------EEEEEE-------------------------HH-----------EEEEEEE----HHHHHH---EEEE--HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------EEEEEEEEE------EEEEEEE-----HHHHHH---EEEEEEEEEE----------EEEEE------E------HHHHHHH----------------------EEEEEEEEEEE------EEEEE-HHHHHHHHEEE-----------EEEE-----E---------EEEE---EEEE----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--	-11.7	-19.8	-0.23
jpred	---HHHHH--HHHHHHHHHH---EE-------EEEE-------HHHHHH------------EEEEEE--EEEEEE------EEEE-----------------EE----EEE--------HHHHHHHH--------HHHHHHHHH---HHHHHHHHHHHHH-HHHHH-----HHHHHHHHHH---EE----HHHHHHHHH--------EEEEEEE-----EEE---HHHHHHH---HHHHHHH---EEEHHHHHHH-----------------HHHHHHHH-------HHHH--------------------------EEEEEEEEE--EEEEE-----EEEEE-HHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------EEEEEEEEEE-------EEEEEE------HHHHH---EEEEEEE------------HHHEE-----------------EEE------------------------EEEEEEEEEEE------EEEE-E---EEEEEEE-----------EEEE--------------EEEEE---EE-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---	-6.9	-15.0	-0.12
prof_king	-HHHHHHHHHHHHHHHHH-HHH----------EEEEE-----EEEEEEE------------EEEEEE-EEEEEEE-----EEEEEEEEH-----EEE-----EE----EEE--------HHHHHHHH---------HHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHH---EEE-----HHHHHHH-------EEEEEEEHH---EEEE---EEEEEE----HHHHHHH----E---EEEEE--EE---------------EEEEEE------EEEEEE--------------EEEEE----EEEEEEEEEE---EEEEEEE--EEEEEE---HHHHHHHHHHHHHHHHHHHHHHEEEEEEE-EEE-HHHHHHH--HHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------EEEEEEEEE-------EEEEEE-----HHHHHH---EEEEEEEEE----------EEEEEE---EEEEEE---HHHHHHHH-----EEEE--------------EEEEEEEEEE-------EEEE------EEEEEEEE-------EEEEEE---------------EEEE---EEE-----HHHHHHHHHHHHHHHHHHHHHHHHH--EEEEEE-	-4.6	-9.1	-0.04
prospect	HHHHHHHHHHHHHHHHHHHHHH----------EEEE--------HHHHHH------------EEEE-----EEE-----HHHHHHHHHHH-----EE----EEE----EE---------HHHHHHHHH--------EEE-HHHHHHHHHHHHHHHHHHH---HHHH------HHHHHHH-EEE-EEE----HHHHHHHH--------EEEEEEE-EEEEEEE---EEEEEE----HHHHHHH--------EEEE--------------------EEEEEE-------------------------------------EEEEEEEEE---EEEEEE---EEEE---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHH-HHHHHHHHH----HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------EEEEEEEEE-------EEEEEE--HHHHHHHHH---EEEEEE--------------EEEEE--------------HHHHH------------------------EEEEEEEEEE-------EEEE-HHHHHHHHHHHHHHHHH-----EEEE-------HHHH----HHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--	-2.0	-11.8	-0.06
psipred	--HHHHHHHHHHHHHHHHHHHHH---------EEEEE-------HHHHHH-----------EEEEE---HHHEE------HHHHHHHHHH-----------EEE----EEEE------HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-HHHH------HHHHHHHHHHHHHHHHH----HHHHHHHH-------EEEEEE---EEEEEEE--EEEEEEE--HHHHHHHH--------EEEEE-HHH---------------EEEEEE--------------------------HH-------EEEEEEEEEEEE--EEEEEE---EEEE--HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------EEEEEEEE-------EEEEEEE-----HHHHHH---EEEEEEEEE----------EEEEE------EEE--------EEEE----------------------EEEEEEEEEEEE------EEEEE----EEEEEEE---------EEEEEEE-------------HHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--	-5	-15.2	-0.08
sspro2	--HHHHHHHHHHHHHHHHHHHHH--------EEEEEE------EEEEH-------------EEEEEE---EEEEE-----HHHEEEHHH---HHHHH----EEE----EEEE-------HHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-----HHHHHHHH---E-EEE-----HHHHHHH-----HH-EEEEEE-----EEEEE---EEEHH---HHHHHHHH---EEE--EEEE-------------------EEEEEEEE-------------------------HH----------EEEEEEEE--HHHHHHH----HHHH-HHHHHHHHHHHHHHHHHHHHHHH--H------HHHHHHHHHHHHHHHHHHHHHHH---HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------EEEEEEEE------EEEEEEE-------HHH----EEEEEEEEE----------EEEEEE---------------HHHH-----------------------EEEEEEEEEEE-------EEEE-HHHHHEEEEEEEE--------HEEEEE--------------EEEE--EEEEE---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--	-7.9	-14.8	-0.12

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva