EVA results for 1gw5:S

DATE : 2002_06_05
TYPE : sec
NRES : 142
HEADER : ENDOCYTOSIS
COMPND : 2 MOLECULE: ADAPTOR-RELATED PROTEIN COMPLEX 2 ALPHA 2
SOURCE : 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
AUTHOR : D.J.OWEN, B.M.COLLINS, A.J.MCCOY, P.R.EVANS

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14.
seq	MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE
dssp	-EEEEEEEE----EEEEEE-----HHHHHHHHHHHHHHHH--------EEEE--EEEEEEEE--EEEEEEE-----HHHHHHHHHHHHHHHHHHH----HHHHHH-HHHHHHHHHHHEE--EE----HHHHHHHHHHHHH--
jpred	---EEEEE-----EEEEEE------HHHHHHHHHHHHHHH------EEEEE---EEEEEEE---EEEEEEE-----HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH----	+14.7	+19.7	+0.30
phd	--EEEEEEE----EEEHHHHHH--HHHHHHHHHHHHHHHH--------EEE---EEEEEEEEEEEEEEEEEE----HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHH-----	+13.2	+12.7	+0.23
phdpsi	--EEEEEEE---EEEEEEE-----HHHHHHHHHHHHHHHH--------EEE---EEEEEEE-E-EEEEEEE----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHH----	+12.9	+7.2	+0.26
prof_king	--EEEEEEE----EEEEEE-------HHHHHHHHHHHHEEE-----EEEEEE--EEEEEEE--EEEEEEEE-----HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHH---	+14.0	+19.0	+0.27
profsec	-EEEEEEEE----EEEEEE-----HHHHHHHHHHHHHHHH--------EEEE--EEEEEEEE--EEEEEEEE----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---EE---HHHHHHHHHHHH---	+16.4	+17.7	+0.36
psipred	-EEEEEEE-----EEEEEE-----HHHHHHHHHHHHHHHH------EEEEE---EEEEEEEE--EEEEEEE-----HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH--EEE---HHHHHHHHHHHHH--	+16.4	+18.8	+0.38
samt99_sec	---EEEEE-----EEEEEEE----HHHHHHHHHHHHHHHHH-------EEE---EEEEEEEE-EEEEEEEE-----HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHH------	+13.2	+17.7	+0.27
sspro2	--EEEEEE------EEEEEE----HHHHHHHHHHHHHHHH-------EEEEE---EEEEEEEEEEEEEEEE---HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH---EEE--HHHHHHHHHHHHH--	+10.3	+12.7	+0.24

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jun 5, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva