EVA results for 1lll:A

DATE : 2002_05_15
TYPE : sec
NRES : 456
HEADER : ISOMERASE
COMPND : 2 MOLECULE: PHOSPHOMANNOMUTASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM;
AUTHOR : R.SAGAJKAR, A.MUTHUVEL, R.REDDY

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,.
seq	MTKLTCFKAYDIRGRLGEELNEDIAWRIGRAYGEYLKPKTVVLGGDVRLTSEALKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEAGDFPPVNEAARGSYRQISLRDAYIDHLLGYISVNNLTPLKLVFNAGNGAAGPVIDAIEARLKALGAPVEFIKIHNTPDGTFPNGIPNPLLPECRDDTRKAVIEHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKHPGAKIIHDPRLTWNTEAVVTAAGGTPVMSKTGHAFIKERMRTEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKRQSLGELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAEEAQAVDRTDGLSMSFADWRFNLRSSNTEPVVRLNVESRGDIPLMEARTRTLLALLNQ
dssp	---HHHE----EEEEE---E-HHHHHHHHHHHHHHH----EEEEE-----HHHHHHHHHHHHHHH--EEEEEEE--HHHHHHHHHH-----EEEE--------EEEEEEEE--E--------HHHHHHHHHH------------EEEE---HHHHHHHHHHH--------EEEEEE---------HHHHHHHH-EE------EEE-----------------HHHHHHHHHHHHHH---EEEEE-----EEEEEE----EE-HHHHHHHHHHHHHHH----EEEE-----HHHHHHHHHH--EEEE----HHHHHHHHHHH---EEE----EEEE------E--HHHHHHHHHHHHH-------HHHHH-----E---EEE------HHHHHHHHH------EEE----EEEEE--EEEEEEE------EEEEEEE--HHHHHHHHHHHHHHHHH-
apssp	-----E---------------HHHHHHHHHHHHHH----EEEE-------HHHHHHHHHHHHHH----EEEE-----HHHHHHHHHH----EEEEEE----------EEE----------HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHH-------EEEEE--------HHHHHHHHHHHH-----EEEEE----------------HHHHHHHHHHHHH-----EEE------EEEEE-----EE---HHHHHHHHHHHHH-----E-E------HHHHHE-E----EEEE----HHHHHHHHH----E--------EE--------HHHHHEHHHHHHHHH---HHHHHHH-HH---------------HHHHHHHHHHHHH----------EEEEE----EEEE-----EEEEEEE----HHHHHHHHHHHHHHHH--	+2.2	+7.3	+0.02
apssp2	----EEE--------------HHHHHHHHHHHHHHH----EEE-------HHHHHHHHHHHHHH----EEEE----HHHHHHHHHH-----EEEEE---------EEEEE---------HHHHHHHHHHHHH------------EEEE--HHHHHHHHHHHH--------EEEEEE------HHHHHHHHHHHHH----EEEEE-----------------HHHHHHHHHHHHHH----EEEE------EEEEEE---EEE--HHHHHHHHHHHHHH-----E-E-----HHHHHHE-E----EEEE----HHHHHHHHH---EEEEE----EE---------HHHHHEHHHHHHHH----HHHHHHHHHHH------EEEE---HHHHHHHHHHHHHH--------EEEEEE----EEEEE------EEEEEEE---HHHHHHHHHHHHHHHHH-	-0.8	+5.6	-0.03
phd	---EEEEEEE---HHHHHHHHHHHHHHHHHHHHHH----EEEEE------HHHHHHHHHHHHHH----EEEE------EEEEEEEE------EEEEE--------HHHHE----------HHHHHHHHHHH---------------------HHHHHHHHHH---------EEEEE------HHHHHHHHHHHHH-----EEEEEEE------------------HHHHHHHHHHH----EEE------EEEEEE----EEEHHHHHHHHHHHHHHH----EEEE-----HHHHHHHHH-----EEE---HHHHHHHHHHH----------HHHHHE-------HHHHHHHHHHHHH-----HHHHHHHH----------E----HHHHHHHHHHHHHH------E----EEEE---EEEEE-------EEEEE----HHHHHHHHHHHHHHHH--	+6.5	+13.9	+0.10
phdpsi	---EEE---------------HHHHHHHHHHHHHHH----EEEEE-----HHHHHHHHHHHHHH---EEEEE-----HHHHHHHHHHH----EEEEE----------EEEE--------HHHHHHHHHHHHHH-----------------HHHHHHHHHHHHH-------EEEEEE------HHHHHHHHHHHHH----EEEEE-------------------HHHHHHHHHHHH----EEE--------EEEE-----E---HHHHHHHHHHHHHH----EEEEEE---HHHHHHHHH----EEEE---HHHHHHHHHH---EEEE------EE------HHHHHHHHHHHHHHHHH---HHHHHHHHHHH------EEEE------HHHH-----------EE----EEEEE---EEEEE------EEEEEEE----HHHHHHHHHHHHHHH--	+7.1	+16.2	+0.14
profsec	----EE---------------HHHHHHHHHHHHHHH---EEEEE------HHHHHHHHHHHHHH---EEEEE-----HHHHHHHHH------EEEEE---------EEEE---------HHHHHHHHHHHHH-------------EEEE-HHHHHHHHHHHH---------EEEEE------HHHHHHHHHHHHH----EEEEEE-----------------HHHHHHHHHHHHH----EEEEE-----EEEEEE----EE--HHHHHHHHHHHHHH----EEEEEE---HHHHHHHHH----EEEE---HHHHHHHHHH---EEEEE----EEE--------HHHHHHHHHHHHHH----HHHHHHHHHHH-----EEEEEE---HHHHHHHHHHH-----EEEE---EEEEE--EEEEEE------EEEEEEE----HHHHHHHHHHHHHHH--	+7.8	+16.0	+0.17
psipred	----EEE-----EEE------HHHHHHHHHHHHHHH----EEEEE-----HHHHHHHHHHHHHH---EEEEE----HHHHHHHHHH-----EEEEEEE--------EEEE--------HHHHHHHHHHHHHHH-----------EEEEE--HHHHHHHHHHH--------EEEEEE------HHHHHHHHHHHHH----EEEEE----------------HHHHHHHHHHHHHHH----EEEE------EEEEEE---EEE-HHHHHHHHHHHHHHH-----EEEEE---HHHHHHHHHH---EEEE----HHHHHHHHH---EEEEE----EE---------HHHHHHHHHHHHHH----HHHHHHHHHHH------EEEE---HHHHHHHHHHHHHHHHHH-----EEEEEE---EEEEE------EEEEEEE---HHHHHHHHHHHHHHHHH-	+5.6	+13.9	+0.11
sspro2	----EEE-------E------HHHHHHHHHHHHHHH----EEEE-------HHHHHHHHHHHHH---EEEEE-----HHHHHHHHH-----EEEEE----------EEEE---------HHHHHHHHHHHHH-------------EEE--HHHHHHHHHHHH--HH-----EEEEE-----HHHHHHHHHHHHHH-----EEEEE-----------------HHHHHHHHHHHHH----EEEEE------EEEE-----E--HHHHHHHHHHHHHH-----EEEE-----HHHHHHHHH----EEE----HHHHHHHHHH---EEEE-----EE---------HHHHHHHHHHHHHH----HHHHHHHHHHH------E------HHHHHHHHHHHHHH----------EEEEE---EEEEEE-----EEEEEEE----HHHHHHHHHHHHHHH--	+7.2	+14.9	+0.16

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 15, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva