EVA results for 1l3n:A

DATE : 2002_05_15
TYPE : sec
NRES : 153
HEADER : OXIDOREDUCTASE
COMPND : 2 MOLECULE: SUPEROXIDE DISMUTASE [CU-ZN];
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : L.BANCI, I.BERTINI, F.CRAMARO, R.DEL CONTE, M.S.VIEZZOLI

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15..
seq	ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ
dssp	--EEEEEEE-----EEEEEEEE------EEEEEEEE----EEEEEE------------------------------------EEEEEEE-----EEE--EE--------------EEEEE------------HHH-------EEEEEE-----
apssp	--EEEEEEE-----EEEEEEEE------EEEEEEEE----EEEEEEEE--------------E--------------------EEEEEE-----EEEEEE----E-----E----EEEEE-------------HH-------EEEEEE-EE--	+15.5	+2.1	+0.23
apssp2	--EEEEEEE-----EEEEEEEE------E-EEEEEE----EEEEEEEE-------HHH----E-------------------EEEEEEE----EEEEEEEE---E----------EEEEE-------------HH-------EEEEEEEEE--	+6.6	-14.8	+0.05
jpred	---EEEEE-----EEEEEEEEE------EEEEEEE--------EEEEEE-------------------------------------EEE----EEEEEE---EEEE-----E--EEEEEEE----------------------EEEEEEEE--	+4.4	+0.9	-0.09
phd	--EEEEEEE----EEEEEEEEE------EEEEEEEEE------EEEEEEE------------------------------------EEE----EEEEEEE--EEEE----EEEEEEEEEEE---------------------EEEEEEEEEE-	+7.1	+5.0	-0.00
phdpsi	--EEEEEEE----EEEEEEEEE-----EEEEEEEEE-------EEEEEEE------------------------------------EEE----EEEEEEE--EEEE----EEEEEEEEEEEE--------------------EEEEEEEEEE-	+2.8	+1.6	-0.06
prof_king	--EEEEEEE----EEEEEEEEEE-----EEEEEEEEE-----EEEEEEEE----------------------------------EEEEE----EEEEEEEEEEEEE-----EEEEEEEEEE----------------------EEEEEEEE--	+5.0	+10.4	-0.01
profsec	--EEEEEEE----EEEEEEEEEE-----EEEEEEEEE------EEEEEE------------------------------------EEEE----EEEEEEE--EEEEE---EEEEEEEEEEE----------------------EEEEEEEEE-	+0.5	-1.7	-0.10
psipred	--EEEEEE-----EEEEEEEEEE-----EEEEEEEE------EEEEEE-------HHHH---------------------------EEE---EEEEEEEEE--EE---------EEEEEE-----------------------EEEEEEEE--	+3.0	-6	-0.06
sspro2	--EEEEEEE----EEEEEEEEE------EEEEEEE---------EEEEE----------------------------H--------EEE----EEEEEEE--EEE------EEEEEEEEE-----------------------EEEEEEEE--	+2.1	-7.4	-0.10

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 15, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva