EVA results for 1kdm:A

DATE : 2002_05_15
TYPE : sec
NRES : 177
HEADER : TRANSPORT PROTEIN
COMPND : 2 MOLECULE: SEX HORMONE-BINDING GLOBULIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : I.GRISHKOVSKAYA, G.V.AVVAKUMOV, G.L.HAMMOND, Y.A.MULLER

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,..
seq	DPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQAEISASAPTSLRSC
dssp	----EE----------EEEEEEHHH----EEEEEEEE----EEEEEEEEE---EEEEEEEE--EEEEEEE----EEEEE----------EEEEEEEE--EEEEEE--EEEEEE-------------EEEEEE------HHH----------EEEEEEE---HHHEEEE-------E-
apssp	----------------EEEEEEHHH----EEEEEEEE----EEEEEEEEE---EEEEEEEE--EEEEEEE----EEEEE----------EEEEEEEE--EEEEEE--EEEEEE---------------EEEE------HHH----------EEEEEEE---HHHEEEEE------E-	+20.5	+25.1	+0.45
apssp2	----HH----------EEEEEEHHH----EEEEEEEE----EEEEEEEEE---EEEEEEEE--EEEEEEE----EEEEE----------EEEEEEEE--EEEEEE--EEEEEE---------------EEEE------HHH----------EEEEEEE---HHHEEEEE------E-	+13.6	+19.5	+0.31
phd	---------------EEEEEE-------EEEEEEEE-----EEEEEEE------EEEEEE---EEEEEEE----EEEEE---------EEEEEEEEE---EEEEE---------------------EEEEEE---------EE----------HHHHEE------------------	+6.1	+9.0	+0.06
phdpsi	------E-E------EEEEEE--------EEEEEEEE----EEEEEE-------EEEEEEE--EEEEEEE-----EEEE---EE----EEEEEEEEE--EEEEEE-----------------------EEEEE--------------HHHHHHHHHHHE------------------	-1.9	-5.1	-0.06
prof_king	---EEEEE------EEEEEE--------EEEEEEEEEE---EEEEEE-------EEEEEEE---EEEEEE----EEEEEEEEE------EEEEEEE---EEEEEEE----EEEE--------------EEEEEE----------------EEEEE----------------EEEE--	-2.8	+6.8	-0.12
profsec	----EEEEE------EEEEEEE-------EEEEEEEEE---EEEEEE-------EEEEEEE---EEEEEE-----EEEEE-EEE----EEEEEEEE---EEEEEE-----EEEEE-------------EEEEEEE---------------EEEEEEEEEE-----------------	-1.5	+2.0	-0.10
psipred	---------------EEEEE--------EEEEEEEEE-----EEEEE-------EEEEEEE--EEEEEEE-----EEEEE---------EEEEEEEE--EEEEEE---EEEEEE--------------EEEEEEEE----------------EEHHHHH------------------	-1.1	+0.7	-0.08
sspro2	----HHH--------EEEEEEE-------EEEEEEEE----EEEEEE-------EEEEEEE--EEEEEEE----EEEEE---------EEEEEEEE---EEEEEE---EEEE--------------EEEEEE-------H------------------HH-----------------	+3.8	+9.7	+0.03

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 15, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva