EVA results for 1kcu:L

DATE : 2002_05_15
TYPE : sec
NRES : 214
HEADER : IMMUNE SYSTEM
COMPND : 2 MOLECULE: PC287 IMMUNOGLOBULIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
AUTHOR : D.T.NAIR, K.SINGH, Z.SIDDIQUI, B.P.NAYAK, K.V.S.RAO, D.M.SALUNKE

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...
seq	DIVLTQSPKSMSMSVGEKVTLSCKASENVDTYVSWYQQRPEQPPALLIYGASNRYTGVPDRFTGSGSATDFTLTISSVQAEDLADYHCGQSYSYPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVANSWTAQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPVVKSFNRNEC
dssp	---EE----EEEE-----EEEEEEE-------EEEEEE------EEEEE---EE-------EEEEE---EEEEEE----HHH--EEEEEE------EE---EEEEE----E--EEEEE---HHHH---EEEEEEEEEEEE----EEEEEE--EEE---EEEEE---------EEEEEEEEEEHHHH----EEEEEEE-------EEEEEE----
apssp	---EEE-----EEE----EEEEEEE---------EEE-------EEEEE----E-------EEEEE---EEEEEE--------EEEEEEE------EE---EEEEE-------EEEEE-----------EEE-EEEE-EE----EEEEEE--EE--------E---------EE-EEE-E----------EEEEEEEE--------EEE-----	+6.0	-2.7	+0.05
apssp2	---EEEE----EEE----EEEEEEE--------EEEEE------EEEEE---EE-------EEEEE---EEEEEE--------EEEEEEE------EE---EEEEE-------EEEEE----HHH-----EE-EEEE-EE----EEEEEE--EE----EE-EE---------EE-EEE-E--HHHHHH--EEEEEEEE------E-EEEE----	+4.2	-4.7	0.00
phd	-EEEEE----EEE-----EEEEEEE------EEEEEEE------EEEEEEE----------EEE-----EEEEEEE-------EEEEEEEE---EEEEE--EEEEEE------EEEEE---HHHHH---EEEEEEEEE-----EEEEEEE---------------------EEEEEEEEEEEE--------EEEEEEE------EEEE------	+8.7	+13.0	+0.06
phdpsi	--EEEE----EEE-----EEEEEEEE---EEEEEEEEE------EEEEEEE----------EEEE----EEEEEE--------EEEEEEEEE--EEE----EEEEEE----------------------EEEEEEEEE-----EEEEEEE--------------EE-----EEEEEEEEEE---------EEEEEEE-----------------	-1.3	-4.3	-0.09
prof_king	-EEEEE---EEEEE---EEEEEEEE------EEEEEEE------EEEEEE---------EEEEE-----EEEEEEE--------EEEEEE-----EEE----EEEEEE-----EEEEE-----------EEEEEEE-------EEEEEEE----------EEE--------EEEEEEEEEE---HE----EEEEEEEE-----EEEEEE-----	+4.3	+9.1	-0.01
profsec	-EEEEE-----EE----EEEEEEEE---EEEEEEEEEE------EEEEEEE---------EEEEE----EEEEEEEEE--EEEEEEEEEEEEEEEEEEE-EEEEEEEE------EEE------------EEEEEEEE------EEEEEEE--------EEEEEEEE------EEEEEEEEEE--------EEEEEEE-------EEEEE-----	-3.1	-0.8	-0.14
psipred	---EEE---EEEE-----EEEEEEE-------EEEEEE------EEEEE--------------------EEEEEE----HHH--EEEEEE------EE----EEEEE------EEEE-----HH------EEEEEEEEEE----EEEEEE---------EEEE--------EEEEEEEEEE-HHHHH----EEEEEE-------EEEEE-----	+10.3	+12.7	+0.17
sspro2	-EEEE------------EEEEEEEE------EEEEEE-------EEEEEEE------------------EEEEEE----HHH-EEEEEE------------EEEEEE-------EEE-----HHH-----EEEEEE-------EEEEEEE----------------------EEEEEEEE--HHHHHH---EEEEEE-------EEEE------	+0.1	-0.4	0.00

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 15, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva