EVA results for 1iko:P

DATE : 2002_05_15
TYPE : sec
NRES : 141
HEADER : SIGNALING PROTEIN
COMPND : 2 MOLECULE: EPHRIN-B2;
SOURCE : 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
AUTHOR : J.TOTH, T.CUTFORTH, A.D.GELINAS, K.A.BETHONEY, J.BARD,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14
seq	SIVLEPIYWNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQD
dssp	--E---EE--------E---EEEE------EEEEE-------------EEEEEEE-HHHHHH-E--------EEE-------EEEEE----------------EEEEEE----E-HHH----E-HHHHH---EEEEEE---
apssp	---E--EEE------------EEEEEE----EEEEE------------EEEEEEE-----------------EE---------HHHHHHH--------E------EEEEE---------------EEE---EE-E-E----	-7.8	-13.9	-0.23
apssp2	------EEE------------EEEEE----EEEEEE------------E-EEEEE-HHHHHH--------EEEEEE-----EEEEEEEE----------E-----EEEEE------HH------EEE-----E-EEE----	-4.1	-7.7	-0.17
jpred	-----EEEE------------EEEEEE---EEEEEE-----------EEEEEEEE----------------EEE--------HHHHHH-----------------EEEEE--------------EEEE----EEEEE----	-1.7	-2.0	-0.1
phd	-EEEEEEEE------------EEEEEE---EEEEEE-----------EEEEEEEE---------------EEEEE-------EEEEEHHH--------EEE---EEEEEEE-------------EEEEEE---EEEEE---	-0.4	-5.5	-0.06
phdpsi	----EEEEE------------EEEEEEE--EEEEEE-----------EEEEEEEEE--------------EEEEE------EEEEEEEEEE-------EEE---EEEEEE-----HHH-------EEEEEEEEEEEEEE--	-4.7	-8.9	-0.11
prof_king	----EEEEEE-----EE----EEEEEE---EEEEEEE----------EEEEEEEE---------------EEEEE-------EEEEEEEE--------EE----EEEEEEE-------------EEEEE--EEEEEEE---	-3.7	-5.3	-0.13
profsec	-----EEEE------------EEEEEEE--EEEEEE-----------EEEEEEEEE--------------EEEEE------EEEEEEEEEE------EEE----EEEEEE---------EE---EEEEE--EEEEEEE---	-7.8	-12.9	-0.19
psipred	------EEE------------EEEEE----EEEEEE------------EEEEEEE-HHHHH---------EEEEEE-----EEE---------------------EEEEE-----HHHHH----EEE-----EEEEE----	+1.4	+6.3	-0.06
samt99_sec	-----EEEE------E-----EEEEEEE--EEEEE-------------EEEEEEE--HH-----------EEEEE-------EEEEEEEE--------EE----EEEEEE---------------EEEEEEEEEEEEE---	-1.6	-6.1	-0.11
sspro2	-EEE--EEE------H-----EEEEEE---EEEEE------------EEEEEEEE---H-----------EEEEE-------EEEEEEE---------E-----EEEEEE---------------EEEE--EEEEEEE---	-1.0	-1.9	-0.10

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 15, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva