EVA results for 1l1d:A

DATE : 2002_05_01
TYPE : sec
NRES : 144
HEADER : OXIDOREDUCTASE
COMPND : 2 MOLECULE: PEPTIDE METHIONINE SULFOXIDE REDUCTASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: NEISSERIA GONORRHOEAE;
AUTHOR : W.T.LOWTHER, H.WEISSBACH, F.ETIENNE, N.BROT, B.W.MATTHEWS

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...
seq	YKKPSDAELKRTLTEEQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPIDAKSVTEHDDFSFNXRRTEVRSRAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQXDAAGYGALKGEV
dssp	-----HHHH-----HHHHHHHHH---------HHHH----EEEEE-----EEEEHHHEE-------EE--------EEEEEE------EEEEEE-----EEEEEE----HHH---EEEE-HHHEEEEEHHHHHHH--HHHHHH-
apssp	-----HHHHHHH---HHHEEE--------------------EEEEEE-----------------------------EEEE--------EEEEEE--------EE-----------EEEE--HHHHH--HH---HH---------	-11.5	-22.0	-0.18
apssp2	-----HHHHHHH--HHHHHHHHH------------------EEEE--------------------------------EE---------EEEEEE---------------------EEEEEEEEEE---HH---HHHHHHHH---	-15.0	-31.5	-0.24
phd	-----HHHHHHHH----EEEE--------------------EEEEEE-----E------------------------EEE--------EEEEEEE-------------------EEEEEE-E--EE------------------	-14.9	-25.7	-0.14
phdpsi	-----HHHHHHHH-HHHHHHHHHH-----------------EEEEEE-----E-------------------------E---------EEEEEE--------EE----------EEEEE--EEEEE---HHHHHHHHHHHH---	-5.7	-13.9	-0.04
profsec	-----HHHHHHH--HHHHHHHHH------------------EEEEEE------------------------------EEE-------EEEEEEEE------EEEE---------EEEEEE-EEEEEE---HHHHH--HHHH---	-5.1	-8.7	-0.05
psipred	-----HHHHHHH--HHHHHHHHHH-----------------EEEE-------------------------------EEE--------EEEEEEE---------------------EEEEEEEEEEEE-HHHHHHHHHHHHH---	-6.9	-25.1	-0.09
samt99_sec	-----HHHHHHHH-HHHHEEEE----------HH-------EEEEE------E-----------------------EEE--------EEEEEEE---------E-----------EEEEEEEEEEE--HHHHHHHHHHHHHHH-	-5.2	-11.7	-0.06
sspro2	-----HHHHHHH--HHHHHHHHH------------------EEEEE---------------------------HHHEEE--------EEEEEEE---------------------EEEEEEEEEEE--HHHHHH----------	-11.2	-24.1	-0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 1, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva