EVA results for 1kt2:A

DATE : 2002_05_01
TYPE : sec
NRES : 182
HEADER : IMMUNE SYSTEM
COMPND : 2 MOLECULE: H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, E-D
SOURCE : 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
AUTHOR : D.H.FREMONT, S.DAI, H.CHIANG, F.CRAWFORD, P.MARRACK, J.KAPPLER

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18.
seq	IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWEFEE
dssp	----EEEEEEEEEEE---EEEEEEEE--EEEEEEE----EEEE--HHHHH--E---HHHHHHHHHHHHHHHHHHHH--------E--EEEEEE---------EEEEEEEEEEE----EEEEEE--EEE---EEE---EE-----EEEEEEEEE------EEEEEEE-------EEEEEE---
apssp	----EEEEEEEEEEE---EEEEEEEE--EEEEEEE-----EEE--HHHHHHHE--HHHHHHHHHHHHHHHHHHHHH--------E--EEEEEE---------EEEEEEEEEEE----EEEEEE--EE----EEE---E------EEEEEEEEE------EEEEEEE-------EEEEE----	+20.0	+27.1	+0.46
apssp2	----EEEEEEEEEEE---EEEEEEEE--EEEEEEE----EEEE--HHHHH--E--HHHHHHHHHHHHHHHHHHHHH--------E--EE-EEE---------EEEEEEEEEEE----EEEEEE--EE----EEE---EE-----EEEEEEEEE------EEEEEEE-------EEEEE----	+14.6	+18.3	+0.37
phd	----EEEE----EE-------EEEEE---EEEEE-----HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE-------------EEEE-----------EEEEEEEE-----EEEEEE-----------E----------EEEEEEEEEE-----EEEEEEE---------EEE----	+1.4	+2.6	+0.05
phdpsi	--E-EEEE-EEE---------EEEE----EEEEE------EEE-------HHH--HHHHHHHHHHHHHHHHHHH-----E--------EEEEE---------EEEEEEEEE-----EEEEEE----------------------EEEEEEEEEE-----EEEEEEE---------EE-----	+1.8	+0.4	+0.07
profsec	----EEEEEEEEEE-------EEEEE---EEEEE-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE------------EEEE-----------EEEEEEE-----EEEEEEEE---------EEEEEE-----EEEEEEEEEEE-----EEEEEEE---------EEE----	-1.3	+2.9	-0.01
psipred	----EEEEEEEEEE------EEEEEE--EEEEEE----EEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------EEEE-----------EEEEEEEEEEE---EEEEEEE--EEE---EEE---EE-----EEEEEEEEE------EEEEEEE-------EEEE-----	+11.8	+16.4	+0.25
sspro2	-----EEEEEEEEE-------EEEE----EEEEEE-----E------HH-H----HHHHHHHHHHHHHHHHHHHHH-----------EEEEE----EE-----EEEEEE------EEEEEEEE---------------------EEEEEEEEE------EEEEEEE--------EEE-----	+1.8	+2.0	+0.10

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 1, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva