EVA results for 1ld0:A

DATE : 2002_04_24
TYPE : sec
NRES : 173
HEADER : STRUCTURAL PROTEIN
COMPND : 2 MOLECULE: GAMMA CRYSTALLIN D;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : A.SALIM, Z.H.ZAIDI

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17..
seq	GKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
dssp	-EEEEEEE---EEEEEEE---E-----------EEEEEE-EEEEE--HHH---EEEE--EEE--HHHH--------EEEEE------EEEEEEEHHHEEEEEEE---E--HHHH----E--EEEEEE--EEEEEE---EEEEEEE--EEE--HHHH-----E--EEEE-----
apssp	-EEEEEE----EEEEEEE----------------EEEE--EEEEEE-------EEEEE------------------EEEEE------EEEEEEE---EEEEEEE------HHHHHE--E--EEEEEE--EEEEE-------EEEE-------------------EEEEE----	+4.2	+1.5	+0.06
apssp2	-EEEEEE----EEEEEEE-------HH------EEEEE--EEEEEE-----EEEEE---------HH---------EEEEE------EEEEEEE---EEEEEEE------HHHH-------EEEEEE--EEEEE------EEEEE----E--HHH---------EEEE-----	+0.7	-1	-0.02
phd	-EEEEEEE-----EEEEE------HHH------EEEE----EEEEEE---EEEEEEEE------HHHHH------E-EEEE------EEEEEEE----EEEEEEE---------EEE---EEEEE---EEEEEE----EEEEEEE--------------------EEEE----	-0.8	-0.5	-0.01
phdpsi	-EEEEEEE------EEEE-----HHHHH-----EEEEE--EEEEEE----EEEEEEE------------------E---EE------EEEEEEE------EEEEE---------------EEEEE---EEEEEEE----EEEEEE--------------------EEEEEE--	-7.9	-14.3	-0.07
prof_king	-EEEEEE------EEEEE--------------EEEEEE--EEEEEE------EEEEE-------------------EEEEE-----EEEEEEEE-----EEEEEE---------------EEEEEE--EEEEEE------EEEEE------------------EEEEEEE---	-2.4	-5.3	-0.03
profsec	--EEEEE------EEEEE-----HHHHHH----EEEEE--EEEEEE----EEEEEEEE----------------EEEEEEE------EEEEEEE-----EEEEEE----HHHH-------EEEEEE--EEEEEEE----EEEEEE----EE--------------EEEEEE--	-8.4	-8.9	-0.11
psipred	-EEEEEE----EEEEEEE------HHHH-----EEEEE---EEEEE-----EEEEE--------HHH---------EEEE-------EEEEEE------EEEEE------HHHH-------EEEEE--EEEEEE-----EEEEEE-------------------EEEE-----	-0.6	-3.4	-0.01
sspro2	-EEEEEE-------EEEE--------HHH----EEEEE--EEEEEE-------EEEEE------HHH------------E-------EEEEEE-------EEEE------HHHH-----EEEEEEE---EEEEE------EEEEE-------HHH------------E-----	-3.2	-2.3	-0.03

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 24, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva