EVA results for 1k4h:A

DATE : 2002_04_24
TYPE : sec
NRES : 372
HEADER : TRANSFERASE
COMPND : 2 MOLECULE: TRNA-GUANINE-TRANSGLYCOYLASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: ZYMOMONAS MOBILIS;
AUTHOR : R.BRENK, E.A.MEYER, R.K.CASTELLANO, M.FURLER, M.T.STUBBS,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37.
seq	RPRFSFSIAAREGKARTGTIEMKRGVIRTPAFMPVGTAATVKALKPETVRATGADIILGNTYHLMLRPGAERIAKLGGLHSFMGWDRPILTDSGGYQVMSLSSLTKQSEEGVTFKSHLDGSRHMLSPERSIEIQHLLGSDIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDEMFRVLDFSVPMLPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTWDGPINIRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYF
dssp	----EEEEEEEE--EEEEEEEE--EEEEE-EEE-EE----E----HHHHHH-----EEE-HHHHHH---HHHHHH---HHHHH-----EEE---HHHHHHH-EEEEE----EEEE------EEEE-HHHHHHHHHHH---EEE-----------HHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-EEEEEE-----HHHHHHHHHHHHHH---EEEE--------HHHHHHHHHHHHHH------EEE--E--HHHHHHHH-----EEE--HHHHHHHH-EE------EE---HHH-------------HHHHH--HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-
apssp	---EEEEEEEEE--EEEEEEEE--EEEEE-EEEEEE---------HHHHHH-----EEE-HHHHHH---HHHHHHH--HHHHH-----EEE---HHHHHHH-EEEEE----EEEE--------EE-HHHHHHHHHHH---EEE-----------HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-EEEEEE-----HHHHHHHHHHHHHH---EEEE--------HHHHHHHHHHHHHH------EEE-----HHHHHHHHH----EEE-----------EE------EE---HHH-------------HHHHH--HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH--	+19.3	+23.4	+0.41
apssp2	----EEEEEEEE--EEEEEEEE--EEEEE-EEE-EE---------HHHHHH-----EEE-HHHHHH---HHHHHHH--HHHHH-----EEE---HHHHHHH-EEEEE----EEEE------EEEE-HHHHHHHHHHH---EEE-----------HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-EEEEEE-----HHHHHHHHHHHHHH---EEEE--------HHHHHHHHHHHHHH------EEE-----HHHHHHHHH----EEE--HHHH-----EE------EE---HHH-------------HHHHH--HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH--	+14.8	+18.4	+0.35
phd	---EEEEEE-------EEEEE------------------------HHHHHH---EEEEE---EEEE---HHHHHHH--HHHH------EEE------EEEEHHHHE------EEEE------EEE--HHHHHHHHH----EEEEE---------HHHHHHHHHHHHHHHHHHHHHHH---------EEEEEE-----HHHHHHHHHHHHHH----EEE--------HHHHHHHHHHHHH-------EEEEE---HHHHHHHHHH----E------------EEEEE--EEEE--------------------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-	+6.6	+3.9	+0.10
phdpsi	----EEEEEE------EEEE-------------E-----------HHHHHH----EEEE--EEEE----HHHHHHH-----E------EE-------EEEE-----------EEEE------E----HHHHHHHHH----EEEEE---------HHHHHHHHHHHHHHHHHHHHHHHH--------EEEEEE-----HHHHHHHHHHHHHH----EEE--------HHHHHHHHHHHHHH------EEEE----HHHHHHHHHH-----------------EEEEE--EEEE-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH--	0.0	-0.3	+0.03
prof_king	---EEEEEEE-----EEEEEE---------EE-------------HHHHHH---EEEE--EEEEEE---HHHHHHH----HH------EEE----EEEEEE---------EEEEEE-----EEE----HHHHHHHH----EEEEE-----------HHHHHHHHHHHHHHHHHHHHHHH-------EEEEEE-----HHHHHHHHHHHHHH----EEE--------HHHHHHHHHHHH---------EEE----HHHHHHHHH-----------HH-----EEEE----EEE---H---------------------HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH--	+1.5	+7.5	+0.05
profsec	----EEEEEE-----EEEEEE----EEE-----------------HHHHHH----EEEE--EEEEE---HHHHHHH--HHHH------EEE-----EEEEE---EE-----EEEEE------EE--HHHHHHHHHH----EEEEE---------HHHHHHHHHHHHHHHHHHHHHHHHH-------EEEEEE-----HHHHHHHHHHHHH-----EEEE-------HHHHHHHHHHHHH-------EEEE----HHHHHHHHHH---HHH----HHH-----EEEE--EEEEE------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-	+2.6	+4.2	+0.03
psipred	----EEEEEEE----EEEEEEE---EE----EE------------HHHHHH----EEEE--EEEE----HHHHHHH--HHHHH------------EEEEE-----------EE--------EEEE-HHHHHHHHHHH---EEEE----------HHHHHHHHHHHHHHHHHHHHHHHH--------EEEEEE-----HHHHHHHHHHHHH-----EEE--------HHHHHHHHHHHHH-------EEEE----HHHHHHHHH---------HHHHH----EEEE----EE-HHHHHHHH-----------------HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-	+4.4	+5.8	+0.08
sspro2	---EEEEEEEE----EEEEEEE----EE--EE-------------HHHHHH----EEEE--HHH-----HHHHHHH--HHHH------EEE----EEEEE----EEE----EEE-------EEE--HHHHHHHHHHH---EEEE----------HHHHHHHHHHHHHHHHHHHHHHHHHH-------EEEEE-----HHHHHHHHHHHHH-----EEEE-------HHHHHHHHHHHH---------EE-----HHHHHHHHH----------HHHHHH---EE-----EE---HHH-H-----------HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-	+7.4	+10.0	+0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 24, 2002
Contact: rost@columbia.edu
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