EVA results for 1l0o:A

DATE : 2002_04_03
TYPE : sec
NRES : 141
HEADER : PROTEIN BINDING
COMPND : 2 MOLECULE: ANTI-SIGMA F FACTOR;
SOURCE : 2 ORGANISM_SCIENTIFIC: BACILLUS STEAROTHERMOPHILUS;
AUTHOR : E.A.CAMPBELL, S.MASUDA, J.L.SUN, O.MUZZIN, C.A.OLSON, S.WANG,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14
seq	MRNEMHLQFSARSENESFARVTVAAFVAQLDPTMDELTEIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDEGVGIPDIEEARQPLFTTKPELERSGMGFTIMENFMDEVIVESEVNKGTTVYLKKHIVKS
dssp	--EEEEEEE-----HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH------HHH-EEEEEEE---EEEEEEEE-------HHHHH-------HHH------HHHHHHH--E--EEEE---EEEE--EEE----
apssp	---EEEEEEHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH--------EEEEEEEE---EEEEEEE-------HHHHH-----------------HHHHHH----EEEE------EEEEEEE-----	+2.5	+8.3	+0.08
apssp2	---EEEEEEE---HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHE---------EEEEEEEEE--EEEEEEEE-------HHHH-----------------HHHHHHHH--EEEEE-----EEEEEEEEEE--	+7.4	+11.3	+0.16
phd	--EEEEEEEE-E-----EEEEEEEEEEEE-----HHHHHHHHHHHHHHHHHHHH-EE-----EEEEEEEEE--EEEEEEE--------HHHH-----------------EEHHHH----EEEE------EEEEEEEEEE--	-1.5	-3.8	+0.04
phdpsi	---EEEEEEE-----HHHHE-EE--EEE--------HHHHHHHHHHHHHHHHHHH-------EEEEEEEE---EEEEEEE-------HHHHHH-------------HHHHHHHHH----EEEE------EEEEEEEEE---	-3.6	+3.2	-0.01
profsec	---EEEEEEE-----HHHHEEEE-EEEE--------HHHHHHHHHHHHHHHHHHH-------EEEEEEEE---EEEEEEEE-------HHHHH--------------EEHHH------EEEEEE-----EEEEEEEEE---	-4.4	-0.9	-0.01
psipred	---EEEEEE---HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH--------EEEEEEEEE--EEEEEEEE-------HHHHHH--------------HHHHHHHHH--EEEEEE----EEEEEEEE----	+7.7	+9.5	+0.17
samt99_sec	---HHHHHHHHHHHHHHHHHHEEEEE----------HHHHHHHHHHHHHHHHHHH-------EEEEEEEE---EEEEEEE---------HHHH----------------HHHHHH---EEEEE------EEEEEEE-----	-6.9	-3.5	-0.12
sspro2	---EEEEEE---HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH-------EEEEEEEEE--EEEEEEE--------HHHHH---------------HHHHHHHHH--EEEEE-----EEEEEEEEE---	+4.7	+8.9	+0.13
jpred	---HHHHHHHHHHHHHHHHHHHH-HHHH-----HHHHHHHHHHHHHHHHHHHHHH-------EEEEEEE----EEEEEEE----------------------------EEEEE-----EEEEEE-----EEEEEEE-----	-6.9	-16.1	-0.12
prof_king	----EEEEEEE-HHHEEEEEEEE---H---------HHHHHHHHHHHHHHHHHH-------EEEEEEEEE---EEEEEEE--------HHHH---------------EEHHHHHHH--EEEEEEE----EEEEEEEE----	-3.4	-7.2	-0.00

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 10, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva