EVA results for 1kl5:A

DATE : 2002_04_03
TYPE : sec
NRES : 121
HEADER : SIGNALING PROTEIN
COMPND : 2 MOLECULE: STREPTAVIDIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVIDINII;
AUTHOR : I.P.KORNDOERFER, A.SKERRA

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12
seq	GITGTWYNQLGSTFIVTAGADGALTGTYIGARGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKPS
dssp	---EEEEE----EEEEEE----EEEEEEE-----HHHEEEEEEEE----------EEEEEEEEEE----EEEEEEEEEEEEE-----EEEEEEEEEE---HHHHHH-EEEEEEEEE-----
apssp	---EEEE-----EEEEEE-----EEEEEEEEE------EEEEE------------EEEEEEEEEE----EEEEEEEEEEEEE-----EEEEEEEEEE----------EEEEEE-EEE----	+8.9	+12.2	+0.14
apssp2	---EEEE-----EEEEEE----EEEEEEE---------EEEEEEE----------EEEEEEEEEE----EEEEEEEEEEEEE-----EEEEEEEEEE------HHH-EEEEEEEEE-----	+9.7	+13.9	+0.24
jpred	----EEE-----EEEEEE-----E--EEEEEE-------E------------------EEEEEEE---------EEEEEEEEE----EEEEEEEE-------------EE-----EEE---	-9.8	-6.8	-0.16
phd	---EEEEE---EEEEEEEE---EEEEEEEEEEE----EEEE---------------EEEEEEEEEE-----EEEEEEEEEEE---EEEEEEEEHHH---------EEEEEEEEEEEEE---	+3.5	+15.3	+0.02
phdpsi	---EEEEE---EEEEEEE---EEEEEEEEEEEE-----EEEE--------------EEEEEEEEE-------EEEEEEEEE---EEEEEEEEEEEE--EE-----EEEEEEEEEEEEEE--	-2.6	+9.6	-0.10
prof_king	---EEEEE----EEEEEE----EEE-EEEEEEE----EEEE--EEE----------EEEEEEEEE--------EEEEEEEEE----EEEEEEEEEE---------EEEEEE--EEEEE---	+1	+2.5	-0.04
profsec	---EEEEE----EEEEEE----EEEEEEEEEEE----EEEEEEEE-----------EEEEEEEEE-------EEEEEEEEEE---EEEEEEEEEEEE-------EEEEEEEEEEEEEE---	+5.0	+11.4	+0.04
psipred	--EEEEE-----EEEEEE-----EEEEEEE--------EEEEEEEEEE--------EEEEEEEE--------EEEEEEEEEE---EEEEEEEEEHHH----HHHHHHHH-------EE---	-5.5	+10.0	-0.15
sspro2	----EEE-----EEEEE--------EEEEE------EEEEEE--------------E-EEEEEEE---------EEE---E----EEEE--EEEE----HHHHHHHH---------EE---	-12.9	-14.1	-0.15

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 10, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva