EVA results for 1kff:A

DATE : 2002_04_03
TYPE : sec
NRES : 120
HEADER : SIGNALING PROTEIN
COMPND : 2 MOLECULE: STREPTAVIDIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVIDINII;
AUTHOR : I.P.KORNDOERFER, A.SKERRA

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....1
seq	GITGTWYNQLGSTFIVTAGADGALTGTYVTARGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKP
dssp	---EEEEE----EEEEEE----EEEEEEE-----HHHEEEEEEEE----------EEEEEEEEEE----EEEEEEEEEEEEE-----EEEEEEEEEE---HHHHHH-EEEEEEEEE----
apssp	---EEEE-----EEEEEE-----EEEEE-E--------EEEEE------------EEEEEEEEEE----EEEEEEEEEEEEE-----EEEEEEEEEE----------EEEEEEEEE----	+11.3	+17.5	+0.24
apssp2	---EEEE-----EEEEEE----EEEEEEEE--------EEEEEEE----------EEEEEEEEEE----EEEEEEEEEEEEE-----EEEEEEEEEE------HHH-EEEEEEEEE----	+8.8	+13.4	+0.19
phd	---EEEEE----EEEEEEE--EEEEEEEEEEEE----EEEEEE-------------EEEEEEEEEE----EEEEEEEEEEEE---EEEEEEEEEE----------EEEEEEEEEEEEE--	+7.5	+17.4	+0.07
phdpsi	---EEEEE---EEEEEEE---EEEEEEEEEEEEE---EEEEE-EEE----------EEEEEEEEE-------EEEEEEEEE---EEEEEEEEEEEEEE--------EEEEEE-EEEEE--	-0.3	+3.6	-0.01
prof_king	--EEEEEE----EEEEEE----EEE-EEEEEEE----EEEE--EEE----------EEEEEEEEE--------EEEEEEEEE----EEEEEEEEEE---------EEEEEE--EEEEE--	0	+2.3	-0.06
profsec	---EEEEE----EEEEEE---EEEEEEEEEEEEE---EEEEEEEEE--EE------EEEEEEEEE-------EEEEEEEEEE---EEEEEEEEEEEE-------EEEEEEEEEEEEEE--	+0.7	+3.3	-0.04
psipred	---EEEE-----EEEEEE-----EEHHHHHHH------EEE----------------EEEEEEE--------EEEEEEEEEEE----EEEEEEEHHH---HHHHHHHHH-----------	-8.2	+3.1	-0.11
sspro2	----EEE-----EEEEEE-------EEEEEE-----EEEEEE--------------E-EEEEEEE---------EEE---E----EEEE--EEEE----HHHHHHHH---------E---	-12.4	-13.7	-0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 10, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva