EVA results for 1k7u:A

DATE : 2002_04_03
TYPE : sec
NRES : 171
HEADER : SUGAR BINDING PROTEIN
COMPND : 2 MOLECULE: AGGLUTININ ISOLECTIN 3;
SOURCE : 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM;
AUTHOR : M.MURAKI, M.ISHIMURA, K.HARATA

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17
seq	XRCGEQGSGMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGKTCPNNHCCSQYGHCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGYCGLGSEFCGEGCQNGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCDG
dssp	---E-----EE-HHH-EE-----EE--HHHH-------------E-HHHH---------EE----EEEE-HHHH-----E-------E--------------EE----EEEE-HHHH---------------EHHH--E------EE-----EEE-HHHH-----E-----
apssp	---HHHH---E-HHH-EE-----EE--HHHH-------------E-EHHH--E--HHH-EE----EEE--HHHH-----E-------E--HHH---------EE----EEEE-HHHH-------------E--------------EE-----EE--HHHH-----------	+11.7	-0.1	+0.12
apssp2	----------E-HHH-EE-----EE--HHHH-------------E-EHHH--E--HHH-EE----EEE--HHHH-------------E--------------EE----EEEE-HHHH----------------------------EE-----EE--HHHH-----------	+6.9	-6.5	+0.05
jpred	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------	-7.0	-64.8	-0.35
phd	----------------E------------------------------------------------------------------------------EE----EEEE----E----------------------------------EE------E------------------	-2.2	-40.0	-0.17
phdpsi	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------	-7.2	-65.4	-0.33
prof_king	------------------------------------------------------------------EE----------------------------------EE-----E------------------------------------------E------------------	-4.2	-44.6	-0.09
profsec	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------	-9.4	-68.1	-0.37
psipred	------------------------------------------------------------------------------------------------------EE-------------------------------------------------------------------	-9.0	-63.3	-0.22
sspro2	-----------------------------------------------------------------------HH------------------------------------------------------------H-------------------------------------	-8.4	-56.6	-0.17

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 10, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva