EVA results for 1kqr:A

DATE : 2002_03_27
TYPE : sec
NRES : 160
HEADER : VIRUS/VIRAL PROTEIN
COMPND : 2 MOLECULE: VP4;
SOURCE : 2 ORGANISM_SCIENTIFIC: RHESUS ROTAVIRUS;
AUTHOR : P.R.DORMITZER, Z.-Y.J.SUN, G.WAGNER, S.C.HARRISON

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....1
seq	LDGPYQPTTFNPPVDYWMLLAPTAAGVVVEGTNNTDRWLATILVEPNVTSETRSYTLFGTQEQITIANASQTQWKFIDVVKTTQNGSYSQYGPLQSTPKLYAVMKHNGKIYTYNGETPNVTTKYYSTTNYDSVNMTAFCDFYIIPREEESTCTEYINNGL
dssp	-EEEE--EEE-----EEEEE-----EEEEEEE-----EEEEEEE---EEEEEEEEEE--EEEEEEEEE-----EEEEEEEE-------EEEEEEEE----EEEEEE--EEEEEEEE----EEEEEE---HHH-EEEE---EEEEEHHHHHHHHHHHHH--
apssp	----------------EEEE-----EEEEEE-----EEEEEEEEE-------EEEEEE--EEEEEEE-----EEEEEEEEEE-----E------------EEEEE---EEEEE-------------------EEEE-E--EEEE----HHHHHHHH----	-7.2	+2.0	-0.07
apssp2	----------------EEEE------EEEEEE----EEEEEEEE-------EEEEEE---EEEEEEEE-----EEEEEEEEE-----EEEE--------EEEEEEE--EEEEEE------------------EEEEEEEEEEEE-HHHHHHHHHHHH---	+0.6	+5.4	+0.03
jpred	---------------EEEEE-----EEEEEE-----EEEEEEEE--------EEEEEE--EEEEEEE------EEEEEEEE-------EEE--------EEEEEE----EEEE-----------EEE-----EEEEE---EEEE-----HHHHHHH----	-1.9	+5.4	-0.00
phd	---------------EEEEE-----EEEEEE-----EEEEEEEEEE------EEEEEEE-EEEEEEE-----EEEEEEEEEE----EEE---EEE---EEEEEEE---EEEEE---------EEEEEE---EEEEEEEE-EEEE-----HHHHHHHH---	-0.8	+7.0	-0.00
phdpsi	---------------EEEEE-----EEEEEE-----EEEEEEEEEE------EEEEEE---EEEEEE-----EEEEEEEEEE-----EEEEEEEE---EEEEEEE---EEEEEE--------EEEEEEE--EEEEEEEEEEEEE---HHHHHHHHHH---	-2.6	+6.5	-0.03
profsec	---------------EEEEE------EEEEEE----EEEEEEEEEE------EEEEEEEEEEEEEEEE----EEEEEEEEEE-----EEEEEEE----EEEEEEE---EEEEEE---------EEEEE---EEEEEEEEEEEEEE--HHHHHHHHHH---	-3.6	+0.8	-0.05
psipred	----------------EEEE------EEEEEE----EEEEEEEE-------EEEEEE---EEEEEEEE-----EEEEEEEEE-----EEEEE-------EEEEEEE--EEEEEE-----------------EEEEEEEEEEEEE--HHHHHHHHHHH---	-2.2	-0.0	-0.03
sspro2	---------------EEEEE------EEEEE-----EEEEEEEE--------EEEEEEEEEEEEEEE------EEEEEEEE------EEE---------EEEEEE---EEEEE-----------EEEE----EEEEEEEEEEEE---HHHHHHHHHH---	-6.8	-4.2	-0.07

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 27, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva