EVA results for 1jmk:O

DATE : 2002_03_27
TYPE : sec
NRES : 230
HEADER : HYDROLASE
COMPND : 2 MOLECULE: SURFACTIN SYNTHETASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS;
AUTHOR : S.D.BRUNER, T.WEBER, R.M.KOHLI, D.SCHWARZER, M.A.MARAHIEL,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....2
seq	GGSDGLQDVTIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIEEEDRLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPEWLASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNTQT
dssp	--------EEEE-----EEEEEE------HHHHHHHHHH---EEEEEE-------HHHHHHHHHHHH-----EEEEEE--HHHHHHHHHHHHHH----EEEEEEE---EE----------HHHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHHH------E--EEEEEE----------EE--HHHE---EEEEE----HHH---HHHHHHHHHHHHHHH--E-
apssp	------EEEEE-------EEEEE--------EE----------EEEE--------HHHHHHHHHHH------EEEE-----HHHHHHHHHHHHH------EEEEEE---------------HHHHHHHHHH----HHHHHHHHHH-HHHHHHHHHHHHHHHHH--------EEEE----------HHHHHH-----EEEEEE---HHE-E----HHHHHHHHHHHE----	+3.0	+9.2	+0.02
apssp2	--------EEEE-------EEEE------HHHHHHHHHH----EEEE----HHHHHHHHHHHHHHHH-----EEEEHHHHHHHHHHHHHHHHHH------EEEEE----------------HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----EEEE-EEEEE----------HHHHHHHH---EEEEEE----HHH-----HHHHHHHHHHHHHHH-	+8.6	+19.7	+0.13
jpred	--------EEEE------EEEEE------HHHHHHHHH------EE--------HHHHHHHHHHHHH-----EEEE-----HHHHHHHHHHHHH------EEEEEE-----------------HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH---------EEEEE---------------------EEEEE------------HHHHHHHHHHHHH----	+9.0	+11.0	+0.19
phd	-------EEEEE-----EEEEEE------HHHHHHHHHH----EEEEE-E---HHHHHHHHHHHHHH-----EEEEE---HHHHHHHHHHHHHH----EEEEEEEE--------------HHHHHHHHHHHH---HHHHHHHHHHHHHHHEEEEEEEEEEEEE-----EEEEHHH-------HHHHHHHHHHH--EEEEE-----HHHHH--HHHHHHHHHHHHHHHH--	+9.4	+15.5	+0.16
phdpsi	------------------EEEEE------HHHHHHHHHHH----EEEE-----HHHHHHHHHHHHHH-----EEEEE-HHHHHHHHHHHHHHHH-----EEEEEEE-------------HHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHH----------EEEEEE--------HHHHHHHH----EEEEE----HHHH---HHHHHHHHHHHHHHH---	+9.7	+14.1	+0.21
profsec	--------EEEE------EEEEE------HHHHHHHHHH-----EEEE----HHHHHHHHHHHHHHH-----EEEEE--HHHHHHHHHHHHHHH-----EEEEEEE-------------HHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHH----------EEEEE--------HHHHHHHHH----EEEEE-----------HHHHHHHHHHHHHHH---	+8.9	+13.4	+0.19
samt99_sec	--------EEE-------EEEEE-----HHHHHHHHHHH-----EEEE----HHHHHHHHHHHHHHH-----EEEE---HHHHHHHHHHHHHHHH----EEEEEE---------------HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH------------EEEEE----------HHHHHHH-----EEEEE----EEE---HHHHHHHHHHHHHHH---	+7.2	+15.8	+0.14
sspro2	--------EEEE-------EEEE-----HHHHHHHHHHH-----EEEEE----HHHHHHHHHHHHHH-----EEEEE--HHHHHHHHHHHHHHH------EEEEEE---------H-----HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------EEEEEE----------HHHHHHHH---EEEEE----HHHH----HHHHHHHHHHHHHHH--	+6.8	+11.4	+0.15

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 27, 2002
Contact: rost@columbia.edu
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