EVA results for 1ib8:A

DATE : 2002_03_27
TYPE : sec
NRES : 164
HEADER : NUCLEIC ACID BINDING PROTEIN
COMPND : 2 MOLECULE: CONSERVED PROTEIN SP14.3;
SOURCE : 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE;
AUTHOR : L.YU, A.H.GUNASEKERA, J.MACK, E.T.OLEJNICZAK, L.E.CHOVAN, X.RUAN,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...
seq	GSGVDAIATIVELVREVVEPVIEAPFELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSKARLAVKLLE
dssp	-----HHHHHHHHHHHHHHHHH----EEEEEEEEEE--EEEEEEEEE------HHHHHHHHHHHHHH------------EEEEEE----------HHHHHHH--EEEEEE---------EEEEEEEEEE--EEEEEEE----EEEEEE--------EEE-----
apssp	----HHHHHHHHHHHHHHHHHHH---EEEEEEEEEEE-EEEEE-EE------EHHHHHHHHHHHHHHE-------E------E-----------HHHHHHHH---EEEEEE-EHH-----EHH--EEEE--EEEE-EEEE---EEEEEE-HHHHHHEE-EE---	+2.0	+0.8	+0.09
apssp2	---HHHHHHHHHHHHHHHHHHHH----EEEEEEEE-----EEEEEEE------HHHHHHHHHHHHHHH----------EEEEEEE----------HHHHHHH---EEEEEEE------EEEEEE-EE----EEEEEEEE----EEEEE-HHHHHHHHHHHEE--	+6.7	+18.3	+0.15
jpred	------HHHHHHHHHHHHHHHHH----EEEEEEE-----EEEEEEE-------HHHHHHHHHHHHHHHH----------EEEEEE----------HHHHHHHH--EEEEEE---------EEEEEEE----EEEEEEE-----EEEEEEE-HHHHHHEE-----	+11	+24.7	+0.23
phd	----HHHHHHHHHHHHHHHHHHH---EEEEEEEEE---EEEEEEEEE--------HHHHHHHHHHHHH---------EEEEEEEE-----------HHHHHH---EEEEEEEE-----EEEEEEEE-----EEEEEEEE-----EEEEEHHHHHHEEEHHHH--	+10.8	+24.6	+0.22
phdpsi	----HHHHHHHHHHHHHHHHHHH---EEEEEEEEE---EEEEEEEEE--------HHHHHHHHHHHHH---------EEEEEEEE----------HHHHHHH---EEEEEEEE-------EEEEEEEE---EEEEEEE------EEEE-HHHHHHHHHHHHH--	+7.7	+21.4	+0.18
profsec	---HHHHHHHHHHHHHHHHHHHH---EEEEEEEEE----EEEEEEEE--------HHHHHHHHHHHHH----------EEEEEEE----------HHHHHHH---EEEEEEEE------EEEEEEEEE---EEEEEEEE----EEEEE-HHHHHHHHHHHHH--	+5.5	+18.4	+0.14
psipred	---HHHHHHHHHHHHHHHHHHHH----EEEEEEEE-----EEEEEEE------HHHHHHHHHHHHHHH----------EEEEEEE----------HHHHHHH---EEEEEEE------EEEEEEEEEE---EEEEEEEE----EEEEE-HHHHHHHHHHHEE--	+5.0	+17.6	+0.13
samt99_sec	-----H---HHHHHHHHHHHHHH---EEEEEEEEE----EEEEEEE-------HHHHHHHHHHHHHHHHH---------EEEEEE----------HHHHHHHH--EEEEEEE------EEEEEEEEEE---EEEEEE-------EEEE-HHHHHHHEEEEE---	+7.1	+14.4	+0.18
sspro2	---HHHHHHHHHHHHHHHHHHHH---EEEEEEEEE-----EEEEEEE------HHHHHHHHHHHHHHH-H--------EEEEEEE----------HHHHHHH---EEEEEEE------EEEEEEEEEE---EEEEEEE-----EEEEEEHHHHHHHHHHHHHH-	+4.2	+11.0	+0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 27, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva