EVA results for 1kzy:C

DATE : 2002_03_20
TYPE : sec
NRES : 232
HEADER : DNA BINDING PROTEIN, PROTEIN BINDING
COMPND : 2 MOLECULE: CELLULAR TUMOR ANTIGEN P53;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : W.S.JOO, P.D.JEFFREY, S.B.CANTOR, M.S.FINNIN, D.M.LIVINGSTON,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23.
seq	ALEEQRGPLPLNKTLFLGYAFLLTMATIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
dssp	-HHHHH------------EEEEE---------HHHHHHHHH----EE-------------EEEEEE------HHHHHHHHH---EEE-HHHHHHHHH-----HHH-E---EEE----EEE------------EEEEEE------HHHHHHHHHH----EEEEEE---------HHH--EEEE-----HHHHHHHHHH---EE-HHHHHHHHHH---------HHH-------
apssp	------------HHHHHHHHHHHHH--------HHHHHHHHH----EEEHHHHHHHHHHHHHHHHHHH-----HHEEEE-----E-EEEEE----HHHHHHHHHHHE------HHHHHHH-----------EEEEE---HHHHHHHHHHHHHHH----HHHH----------EEEEEEEEE------HHHHHHHHHHH--HHHHHHEHHE-EE-------------------	-20.8	-17.1	-0.27
apssp2	---HH---------EHEEEEEEEEE------HHHHHHHHHHH---EEHHHHHHHHHHH----EEEE----HHHHHHHHHHH------HHHHHHHHH----H-----HH-----HHHHH--------------EEEEEEE--HHHHHHHHHHHHH-HHHHHHH-HHHHH----E-EEEEEE-E----HHHHHHHHHHH------HHHHHHHHH--------------------	-8.0	-1.4	-0.13
phd	--------EEEEE----HHHHHHHHHHHHHHHHHHHHHHHH---EEEEE--HHHHHHHHHHHHHHHHHHHHHHHHEHHHH---EEEEEEHHHHHHHHHHHH-----EEE----------------------EEEEEE-------HHHHHHHHHH----EEEE--------------EEEEEEE-----------------EEEHHHHHHHHHHHHH-EEE------------	-12.3	-19.5	-0.14
phdpsi	----------------EEEEEEEE--------HHHHHHHHHH---EEEEE------HHHEEEEEEE----HHHHHHHHHH----EEEHHHHHHHHHH---------EE-----------------------EEEEEEE------HHHHHHHHHH----EEEE----------EEEEEEEEEE----HHHHHHHH-----EEEEHHHHHHHHHH-------------------	+4.7	+6.9	+0.08
profsec	------------HHHHHHHHHHHHH--------HHHHHHHHH---EEEEE----------EEEEEE-----HHHHHHHHH----EE-HHHHHHHHHH---------EE------------------------EEEEE------HHHHHHHHHHH----EEE-----------EEEEEEEEEE-----HHHHHHHHH-------HHHHHHHHHH-------------------	-0.0	+1.7	-0.04
psipred	--------------HHHHHHHHHHH--------HHHHHHHHH----HHHHHHHHHHH----EEEE-----HHHHHHHHHHH------HHHHHHHHH---EE-------------------------------EEEEEEE--HHHHHHHHHHHHH--HHH------HHHH---EEE---EEEE----HHHHHHHHHHH------HHHHHHHHEE-------------------	-11.4	-13.6	-0.21

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 20, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva