EVA results for 1kyg:C

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16..
seq	SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGE
dssp	-----E----EEEEEE--EEEEEEHHH----EEEEEE----------HHHHHHHH-HHHHHH--EEEEEEE---HHHHHHHHHH-HHHH----EEEE----HHHHH---EE----EE-EEEEEE----EEEEEEEE-------HHHHHHHHHHHHHHHH----
apssp	-------------EEE----EEEEEE-----EEEEEEE---------HHHHHHHHHHHHHHH---EEEEEE---HHHHHHHH----------EEEE----HHHHHHH------------EEEEE----EEEEEEE--------HHHHHHHHHHHHHH------	+6.7	+9.9	+0.14
jpred	---------------------EEEEE-----EEEEEEE---------HHHHHHHHHHHHHHH---EEEEEE---HHHHHHHHH---------EEEE----HHHHHHH------------EEEEE-----EEEEEE--------HHHHHHHHHHHHHH------	+4.6	+4.9	+0.13
phd	--------------E----EEEEEE-----EEEEEEEE--------HHHHHHHHHHHHHHHHH--EEEEEE----HHHHHHHHH----EEEEEEEE----HHHHHH---E------EEEEEEEE-----EEEEEE--------HHHHHHHHHHHHHHH-----	+10.2	+12.4	+0.21
phdpsi	---------------------EEEEE-----EEEEEEE-------HHHHHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHHH------EEEEE----HHHHHH--EEE-----EEEEEEEE----EEEEEEE-------HHHHHHHHHHHHHHHH-----	+5.2	+7.4	+0.13
psipred	----------EEEE-----EEEE-HHHH---EEEEEEE---------HHHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHHHHHH----EEEEE---HHHHHHH------------EEEEE----EEEEEEEE-------HHHHHHHHHHHHHHHH----	+10.9	+12.1	+0.26
samt99_sec	---------------------EEEHHH----EEEEEE----------HHHHHHHHHHHHHHHH--EEEEE----HHHHHHHHHHH-------EEEE----HHHHHHH----------EEEEEEE----EEEEEEE--------HHHHHHHHHHHHHHHH----	+6.4	+5.5	+0.19
sspro2	----------EEEEE----EEEEEHHH----EEEEEEE---------HHHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHHHH-------EEE-----HHHHH----------EEEEEEEE----EEEEEEE--------HHHHHHHHHHHHHHHH----	+12.6	+12.8	+0.29
profsec	--------------------EEEEEE-----EEEEEEE--------HHHHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHH------EEEEEE----HHHHHH---E------EEEEEEEE----EEEEEEEE-------HHHHHHHHHHHHHHH-----	+5.4	+4.5	+0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva