EVA results for 1kqs:O

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14..
seq	TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA
dssp	---HHHHHHHHHH----HHHEEE-HHHHHHHHH---HHHHHHHHH---EEE--------HHHHHHHHHHH------HHH----HHHH--HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH-------HHHHHHHH--
apssp	--HHHHHHHHHHHHH----EEEE-----HHHHHHHHHHHHHHHHH--EEEE-------HHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHH------HHHHHHHHHH-----HHHHHHHHHHHH-	+4.8	+7.2	0.00
jpred	--HHHHHHHHHHHHH----EEEE----HHHHHHHH-HHHHHHHHH--EEEE--------HHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHH-------HHHHHHHH--	+10.8	+14.3	+0.13
phd	--HHHHHHHHHHHHHH---EEEE----HHHHHHH-HHHHHHHHHH---EEEE-------HHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH------HHHHHHHHH--	+13.6	+17.4	+0.17
phdpsi	--HHHHHHHHHHHHH----EEEE---HHHHHHHHH-HHHHHHHHH---EEEE-------HHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH------HHHHHHHH--	+12.1	+14.7	+0.17
profsec	--HHHHHHHHHHHHH----EEEE---HHHHHHHHHHHHHHHHHHH---EEEE------HHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH-------HHHHHHHH--	+8.5	+6.2	+0.10
psipred	---HHHHHHHHHHHH------EE-HHHHHHHHH---HHHHHHHHH--EEEE--EE-----HHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH-------HHHHHHHHH-	+9.3	+7.1	+0.12
sspro2	--HHHHHHHHHHHH-----EEEE-HHHHHHHHHHH-HHHHHHHHH---EEE---EE--HHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH-------HHHHHHHH--	+9.1	+7.0	+0.10

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva