EVA results for 1kqs:M

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,.
seq	ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL
dssp	----------HHHH-----HHHHHHHHH----EEEEEE----EEEEEEE------EEEEEEE-HHHHHH--------HHHHHHHHHHHHHHHHH----E-EEE----------HHHHHHHHHHHH--E----HHH----HHHH-HHHHHHHH----------------HHHHHHHHHHH-------
apssp	---HHHHHHHHHHHHHHHHHHHHHHHH-----EEEEEE---EEEEEEEE------EEEEEE---HHHHHH-------HHHHHHHHHHHHHHHHH-----EEEE---------HHHHHHHHHHHH----------------HH-HHHHHHHHHHHH-HHHHH-------HHHHHHHHHHHH------	+5.2	+3.0	+0.11
jpred	-------E----------HHHHHHHHHH----EEEEEE---EEEEEEEE------EEEEEE--HHHHH---------HHHHHHHHHHHHHHHHH----EEEEE---------HHHHHHHHHHHH-------------------HHHHHHHHHHHHHHH----------HHHHHHHHHHHHH-----	+9.9	+12.0	+0.18
phd	-----EEEEE-HHHHHHHHHHHHHHHH-----EEEEEE----EEEEEE-------EEEEEE----------------HHHHHHHHHHHHHHHHHH---EEEEE---------HHHHHHHHHHHH------------------HHHHHHHHHHHHHHHH----------HHHHHHHHHHH-------	+10.0	+11.1	+0.19
phdpsi	------EE-HHHHHHHH--HHHHHHHH-----EEEEEE----EEEEEEE------EEEEEE----------------HHHHHHHHHHHHHHHHHH---EEEEE-------HHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH------	+4.4	+4.7	+0.12
profsec	---------HHHHHHH---HHHHHEEE-----EEEEEE---EEEEEEEEE-----EEEEEE--HHHHH---------HHHHHHHHHHHHHHHHH----EEEEE---------HHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHH--------HHHHHHHHHHHH------	+6.5	+11.7	+0.11
psipred	----HHHHHHHHHHHHHHHHHHHHHHHH----EEEEEEE---EEEEEEE------EEEEEEE---HHHH--------HHHHHHHHHHHHHHHHHH---EEEE----------HHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHH----HHHHHHHHHHHHH---------	+0.6	-0.1	+0.05
sspro2	------EE--EE------HHHHHHHHH-----EEEEEEE--EEEEEEEEE-----EEEEEE-HHH-HH---E-----HHHHHHHHHHHHHHHHH---EEEEEE----------HHEEHE---H------------------E--HHHHHHHHH--HHHHHH---HHHHHHHHHHHHHHHHH-----	-2.8	-14.2	-0.05

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva