EVA results for 1kqs:A

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,..
seq	GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG
dssp	----HHHHHH---HHH---HHH----------------EEEEEEEEEE----EEEEEEEE----EEEEE-E---E---EEEE----------EEEHHH-----EEE-E---------E-------EEEEE-----EEEE-----EEEE----EEEE--E----HHH-----HHHHHHHH-----------HHH--------------------EE-----------EE---------
apssp	---E---------EEEE-----HHHHHHHHE------EE-EEEEEEE-------EEEEEE----EEEEEE--------EEEE----------------------E-EEEE------EEEEE---EEEEEEE---EEEEE-----EEE-----EEEEEEE-------HHHHH--EHHHHHH--------EEEEEE---------------------------------EEE-------	-6.4	-4.3	-0.18
jpred	-------------EEEE---------HHHHH--------EEEEEEEE-------EEEEEE----EEEEEE-------EEEEE--------------------EEEEEEEE------EEEE----EEEEEEE---EEEEEE----EEEE----EEEEEEE---------HHHH-HHH------------EEEEE--------------------------------------------	-1.4	-10.8	-0.12
phd	---EEEE-----EEEE----------E-E---------EEEEEEEEE------EEEEEEEE---EEEEEE----EE-EEEEE----EEE-------------EEEEEEEE------EEEEE----EEEEEE---EEEEEE----EEEE----EEEEEEEE---------------------------EEEEEEE-------------------------------------------	+1.7	-11.8	-0.04
phdpsi	--EEEEE-----EEEE------EEEEEEEEE--------EEEEEEEE------EEEEEEEE---EEEEEE----EEEEEEEE-----EE-------------EEEEEEEE------EEEE-----EEEEEE---EEEEEE-----EEEEEEEEEEEEEEE--------------E------------EEEEEEE-------------------------------------------	-8.7	-14.1	-0.19
profsec	--EE-EE------EEE-----EEEEEEEEEEE------EEEEEEEEE-----EEEEEEEEE---EEEEEE----EE-EEEEE-----EE-------------EEEEEEEE------EEEEE---EEEEEEE---EEEEEE----EEEEE-EEEEEEEEEE--------HHH----------------EEEEEEE-------------------------------------------	-10.9	-16.1	-0.20
psipred	-----------EEEEEE-----EEEEEEE--------EEEEEEEEEE------EEEEEEE----EEEEE---------EEEE----------EEE--------EEEEEE------EEEEE----EEEEEEE---EEEEEE----EEEE-----EEEEEEE--------EE--------------------EEEE-------------------------------------------	-4.7	-11.7	-0.15
sspro2	--EE------EEEEEE------EEEEEEE----------EEEEEEEE------EEEEEEE----EEEEEE----EE--EEEE--------------------EEEEEEEE------HEEEE---EEEEEE----EEEEE-----EEEE----EEEEEEEE-------------HHHHHHHH------EEEEEEE--------------------------------EEEEEE-----	-6.6	-3.2	-0.18

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva