EVA results for 1j8d:A

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....1
seq	XQQKLENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKXLXDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKETACFDLXKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREXSDXILQAQGKSSVFDTAQGFLKSVKSXGQ
dssp	-HHHHH---EEEE---------EEEEE--EEEEEEEEHHHHHHHHHHHH---EEEEE-----HHHHHHHHHH---EEE-----HHHHHHHHHHHH---HHHEEEEE--HHHHHHHHH--EEEE-----HHHH----EE--------HHHHHHHHHHHH----HHHH-HHHHHH-HHH---
apssp	-------EEEEEEE---E----EEE-----HHHHHEE--------------EEEEEE-----HHHHHHHHHH-HHHHHH--EHHHHHHHHHHHH-------EEE--------HHHHH---EEEE----EE-----EEEEE------HHHHH---HHHH----HHHHHHHHHHHH------	-10.9	-9.2	-0.13
jpred	--------EEEEEE--------EEEEE---EEEE-----HHHHHHHHHH---EEEEE-----HHHHHHHHH---EEEEE----HHHHHHHHHHH------EEEEE------HHHHHH----EE-----HHHHHHH-EEEE-----HHHHHHHHHHHHH-----HHHHHHHHHHHHH----	+5.5	+12.7	+0.11
phd	--HHHH---EEEEE---------EE------EEEEEEE-----HHHHHHHH-EEEEE-----HHHHHHHHHH--EEEEE----HHHHHHHHHHHH----EEEEEE-------HHHH----EEEE---HHHHHHH--EEEE------EHHHHHHHHHHH-----HHHHHHHHHHHHHH---	+9.8	+17.8	+0.18
phdpsi	--HHHH--EEEEEEE-------EEEEE---EEEEEEE---HHHHHHHHH---EEEEE----HHHHHHHHHH-----EE-----HHHHHHHHHHHH-----EEEEE----HHHHHHHHH---EE---HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH---	+5.4	+12.3	+0.11
profsec	---HHH--EEEEEE---EE---EEEEE----EEEEEEE--HHHHHHHHH---EEEEEE---HHHHHHHHHH----EEE-----HHHHHHHHHHHH-----EEEEE------HHHHHH----EEE---HHHHHHHHHHHHH------HHHHHHHHHHHHH--HHHHHHHHHHHHHHHH---	+2.6	+6.3	+0.04
psipred	----HHH-EEEEE----EEE--EEEE-----EEEEEE---HHHHHHHHH---EEEEE----HHHHHHHHHH----EEE-----HHHHHHHHHHHH---HHHEEEE-----HHHHHHH---EEE-----HHHHHH---EEE-----HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH---	+5.9	+10.1	+0.12
samt99_sec	-HHHHH-EEEEEE----EEE----E--HHHHHHHHH----HHHHHHHHHH--EEEEE----HHHHHHHHHHH----EEE----HHHHHHHHHHHH-----EEEEE----HHHHHHHHH---EE-----HHHHHHHHHEH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---EE--	-4.6	-3.0	-0.09
sspro2	-HHHHHHH-EEEEE--------EEEE-----EEEEEEHHHHHHHHHHHH---EEEEEE----HHHHHHHHH----EEE-----HHHHHHHHHHH----HHHEEEE------HHHHHHH---------HHHHHHHHHHHHH----HHHHHHHHHHHHHH-----HHHHHHHHHHHHHH---	+4.6	+9.3	+0.09

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva