EVA results for 1f9n:A

DATE : 2002_02_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,..
seq	KGQRHIKIREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIKELHLVKVPTNNGSYKYSLPADQRFNPLSKLKRALMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLELL
dssp	---HHHHHHHHHHH-----HHHHHHHHHHH-----HHHHHHHHHHH--EEEE-----EEEE--------HHHHHHHHHHHHEEEEEE---EEEEEE----HHHHHHHHH------EEEEEE---EEEEEE--HHHHHHHHHHHH---
apssp	--HHHHHHHHHHH------HHHHHHHHHH----EEHHHHHHHHHH--EEEE------EEEEE---------HHHHHHHHHHHHHHH----EEEEEE---HHHHHHHHHHH----HHEEEEE---EEEEEEE----HHHHHHHHHHH-	+6.7	+22.4	+0.10
jpred	---HHHHHHHHHHH-----HHHHHHHHHH----E-E-HHHHHHHH--EEEE------EEEEE--------HHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHHH-----EEEEE----EEEEEE-----HHHHHHHHHH--	+9.2	+21.3	+0.14
phd	---HHHHHHHHHHHHHHHHHHHHHHHHHH----EEEEHHHHHHHHH---EE-----EEEEEEE--------HHHHHHHHHHHEEEE----EEEEE---HHHHHHHHHHHHH----EEEEE----EEEEEE-----HHHHHHHHHH--	+10.7	+21.5	+0.18
phdpsi	--HHHHHHHHHHHHH----HHHHHHHHHH-----HHHHHHHHHHHH---EE------EEEEE-------HHHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHHH------EEEE----EEEEEE----HHHHHHHHHHH--	+10.4	+23.9	+0.20
profsec	--HHHHHHHHHHHH-----HHHHHHHHHH------HHHHHHHHHHH--EEE------EEEEE--------HHHHHHHHHHHHHHH-----EEEEEE---HHHHHHHHHHH-----EEEEE----EEEEEE----HHHHHHHHHHHH-	+11.0	+20.9	+0.22
psipred	-HHHHHHHHHHHHH-----HHHHHHHHHH-----HHHHHHHHHHH--EEEE------EEEEE-------HHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHH-----EEEEE----EEEEEE--HHHHHHHHHHHHHH-	+9.7	+18.4	+0.18
sspro2	--HHHHHHHHHHHH-----HHHHHHHHHH---EEE--EHHHHHHHH--EEE-----EEEEEE--------HHHHHHHHHHHEEE------EEEEE----HHHHHHHHHHH-----EEEEE----EEEEEE-----HHHHHHHHHHH-	+6.1	+21.1	+0.12

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 13, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva