EVA results for 1h5w:C

DATE : 2002_02_20
TYPE : sec
NRES : 251
HEADER : VIRUS
COMPND : 2 MOLECULE: UPPER COLLAR PROTEIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE PHI-29;
AUTHOR : A.GUASCH, J.POUS, B.IBARRA, F.X.GOMIS-RUTH, J.M.VALPUESTA,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....2
seq	QKRNRWFIHYLNYLQSLAYQLFEWENLPPTINPSFLEKSIHQFGYVGFYKDPVISYIACNGALSGQRDVYNQATVFRAASPVYQKEFKLYNYRDMKEEDMGVVIYNNDMAFPTTPTLELFAAELAELKEIISVNQNAQKTPVLIRANDNNQLSLKQVYNQYEGNAPVIFAHEALDSDSIEVFKTDAPYVVDKLNAQKNAVWNEMMTFLGIKNANDEQIESSGTVFLKSRE
dssp	-HHHHHHHHHHHHHHHHHH--EEEE-------HHHHHHHHHHH-EEEEEEE---EEEEE-EEEE----------EEEEE----EEEEEE----------EEEEEE--------HHHHHHHHHHHHHHHHHHHHHHHH----EEEEE-------HHHHHHH------EEEE--------EEEEE------HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
apssp	----HHHHHHHHHHHHHHHHHHHH----------HHHH-EHH--EEEEE---EEEEEEE----------------EE---------EEEEE---------EEEEE----------HHHHHHHHHHHHHHHHHHH------EEEEEE----HHHHHHHHHH------EEEEEE------EEEE-----E-EHHHHHHHHHHHHHHHHHHE-------------HHHHHHHH	+1.7	+11.8	+0.01
jpred	----HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH---EEEE----EEEEE----------------EEE----HHHHHHHHHH----------EEEE----------HHHHHHHHHHHHHHHHHHH------EEEEEE----HHHHHHHHHHH-----EEEEE-------EEEEE---HHHHHHHHHHHHHHHHHHHEEEEE------EEEE--HHHHHHHH	-0.4	+15.9	-0.04
phd	------EEHHHHHHHHHHHHHHHHH--------HHHHHHHH--EEEEEE---EEEEEEE-------HHHHHHHHHEE----HHHHHHHHHHHHHHHHH---EEEEE--------HHHHHHHHHHHHHHHHHEEE-------EEEEE----HHHHHHHHHHHH----EEEEEEE------EEE----HHHHHHHHHHHHHHHHHHHHHHEE--------E---EEEE---H	-10.1	+5.2	-0.11
phdpsi	-----HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH---EEEEEE--EEEEEEE-----------------------HHHHEEEEE----------EEEE---------HHHHHHHHHHHHHHHHHHHHHH-----EEEE-----HHHHHHHHHHH-----EEEEEE------EEEEE---HHHHHHHHHHHHHHHHHHHEEEEE-------------EEEHHHH	-1	+9.8	-0.01
prof_king	-----EHHHHHHHHHHHHHHH-HH--------HHHHHH-HH---EEEEE----EEEEEE---------------EEEE----HH-EEEEEEE--------EEEEE------------HHHHHHHH-EEEEEEE-------EEEEEE----EE-HHHHHHHH-----EEEEE------EEEEEE------HHHHHHHHHHHHHHHHHHH--------EEEE-EEEEE--HH	-3.7	+6.0	-0.04
profsec	----HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH---EEEEEE---EEEEEEE------EE------EEEE------EEEEEEEE---------EEEE---------HHHHHHHHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHH-----EEEEEEE-----EEEEE---HHHHHHHHHHHHHHHHHHHHHH--------HHH---EEEHHHHH	+2.7	+8.8	+0.04
psipred	----HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH---EEEE----EEEEEE---------------EEEE-----EEEEEE--HHHH-----EEEEE--------HHHHHHHHHHHHHHHHHHHH--------EEEEE----EEHHHHHHHHH-----EEEE--------EEEEE----HHHHHHHHHHHHHHHHHHHHH--------EEEE-EEEEEHHHH	+2.7	+11.2	+0.02
sspro2	--HHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH---EEEE---EEEEEEE-------E-------EEEE------EEEEEEEHHH------EEEEE---------HHHHHHHHHHHHHHHHHHHHHH-----EEEEE-------HHHHHHHH-----EEEEE-------EEEEE----HHHHHHHHHHHHHHHHHHHHH---------EE---EEE-HHHH	+2.8	+12.1	+0.02

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Feb 20, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva