EVA results for 1h5w:A

DATE : 2002_02_20
TYPE : sec
NRES : 249
HEADER : VIRUS
COMPND : 2 MOLECULE: UPPER COLLAR PROTEIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE PHI-29;
AUTHOR : A.GUASCH, J.POUS, B.IBARRA, F.X.GOMIS-RUTH, J.M.VALPUESTA,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,
seq	RQKRNRWFIHYLNYLQSLAYQLFEWENLPPTINPSFLEKSIHQFGYVGFYKDPVISYIACNGALSGQRDVYNQATVFRAASPVYQKEFKLYNYRDMKEEDMGVVIYNNDMAFPTTPTLELFAAELAELKEIISVNQNAQKTPVLIRANDSLKQVYNQYEGNAPVI
dssp	-HHHHHHHHHHHHHHHHHHH--EEEE-------HHHHHHHHHHH-EEEEEEE---EEEEE-EEEE----------EEEEE----EEEEEE-----------EEEEE--------HHHHHHHHHHHHHHHHHHHHHHHH----EEEEE---HHHHHH---------
apssp	-----HHHHHHHHHHHHHHHHHHHH----------HHHH-EHH--EEEEE---EEEEEEE----------------EE---------EEEEE---------EEEEE----------HHHHHHHHHHHHHHHHHHH-------EEEEE--HHHHHHHH------EE	+1.4	+12.2	+0.01
jpred	-----HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH---EEEE----EEEEE----------------EEE----HHHHHHHHHH----------EEEE----------HHHHHHHHHHHHHHHHHHH-------EEEE----HHHHHHHH-----EE	-0.4	+14.8	-0.00
phd	-------EEHHHHHHHHHHHHHHHHH--------HHHHHHHH-EEEEEEE---EEEEEEE-------HHHHHHHHHHE----HHHHHHHHHHHHHHHH----EEEEE--------HHHHHHHHHHHHHHHHHEEE-------EEEE----HHHHHHHHH----EE	-11	+5.6	-0.12
phdpsi	-----HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH---EEEEEE--EEEEEEE-----------------------HHHEEEEEE----------EEEE---------HHHHHHHHHHHHHHHHHHHHHH-----EEEEE--HHHHHHHHH----EEE	+2.5	+12.0	+0.07
prof_king	-----HHHHHHHHHHHHHHHHH-HH--------HHHHHH-HH---EEEEE----EEEEEE---------------EEEE----HH-EEEEEEE--------EEEEE------------HHHHHHHH-EEEEEEE-------EEEEEE---HHHHHHHH-----EE	-4.0	+6.6	-0.06
profsec	----HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH---EEEEEE---EEEEEEE--------------EEEE------EEEEEEEE---------EEEE---------HHHHHHHHHHHHHHHHHHHHHH-----EEEEE--HHHHHHHHH-----EE	+4.3	+17.7	+0.09
psipred	-----HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH---EEEE----EEEEEE---------------EEEE-----EEEEEE--HHHH-----EEEEE--------HHHHHHHHHHHHHHHHHHHH--------EEEE---HHHHHHHHH-----EE	+2.5	+9.9	+0.04
sspro2	--HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH---EEEE---EEEEEEE-------E-------EEEE------EEEEEEEHHH------EEEEE---------HHHHHHHHHHHHHHHHHHHHHHH----EEEEE-HHHHHHHHHH-----EE	+3.0	+10.5	+0.07

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Feb 20, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva