EVA results for 1kps:B

DATE : 2002_02_13
TYPE : sec
NRES : 156
HEADER : LIGASE/PROTEIN TRANSPORT
COMPND : 2 MOLECULE: UBIQUITIN-LIKE PROTEIN SUMO-1 CONJUGATING ENZYME;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : V.BERNIER-VILLAMOR, D.A.SAMPSON, M.J.MATUNIS, C.D.LIMA

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,.
seq	TDLSTFLSFPSPEKLLRLGPKVSVLIVQQTDTSDPEKVVSAFLKVASVFRDDASVKTAVLDAIDALMKKAFSCSSFNSNTFLTRLLIHMGLLKSEDKIKAIPSLHGPLMVLNHVVRQDYFPKALAPLLLAFVTKPNGALETCSFARHNLLQTLYNI
dssp	--HHHHHH---HHHHHH----HHHHHHH------HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH----------------HHHHHHHHHHHH-----HHHHHHHHHHH-----------HHHHHHHHHHHH-
apssp	-----EE------HHEE-----EEEEEEEE-----HHHHHHHHH--EEE----HHHHHHHHHHHHHHHH--E------HHHHHHHHHHH---------HH-------HHHHHHHHH-----HHHHHHHHHHHE--------HHHHHHHHHHHHH--	+0.3	+12.6	-0.06
jpred	-----E------HHHH------EEEEEEE------HHHHHHHHHH-EEE----HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH-----------------EEEHHHHHH-------HHHHHHHHH---------HHHHHHHHHHHHH--	+2.4	+18.3	-0.00
phd	--EEEE-----HHHHHH----EEEEEEEE-----HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH-HHHH---EHHHHH----EEEEEEE-EE---HHHHHHHHHHHHH------EHHHHHHHHHHHHHH--	-2.8	-5.1	-0.06
phdpsi	-----------HHHHHH-----EEEEEE------HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH--------HHHH------EEEEE-EEE----HHHHHHHHHHHH----------HHHHHHHHHHHH--	+1.0	+3.6	0.00
prof_king	---EEEE----HHHHHH-----EEEEEE------HHHHHHHHEEEEEEE----HHHHHHHHHHHHHHHHHH--------HHHHHHHHH-------------------HHHHHHHHH------HHHHHHHHHE----------HHHHHHHHHHHH--	+4.8	+19.3	+0.14
profsec	-----------HHHHHH-----EEEEEEE-----HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH-----HHHHHH-------HHHHHHHHH----HHHHHHHHHHHH----------HHHHHHHHHHHH--	+4.4	+5.7	-0.03
psipred	--HHHH-----HHHHHH----EEEEEEEE-----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH-----HHHHHHHH----HHHHHHHHHHH----HHHHHHHHHHH-----HH----HHHHHHHHHHH--	+4.0	+5.8	-0.05
sspro2	---HHH-----HHHHHH----EEEEEEEE-----HHHHHHHHHEHHHHHH---HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH---HHHHHH-H----HHHHHHHHHHHHH-HHHHHHHHHHHH------HH-HHHHHHHHHHHHH--	-2.0	-8.9	-0.16

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Feb 13, 2002
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