EVA results for 1kn9:A

DATE : 2002_01_30
TYPE : sec
NRES : 234
HEADER : HYDROLASE
COMPND : 2 MOLECULE: SIGNAL PEPTIDASE I;
SOURCE : 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
AUTHOR : M.PAETZEL, R.E.DALBEY, N.C.J.STRYNADKA

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17.
seq	VRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSNALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQ
dssp	-EE--EEEEE-------------EEEEEEE-EEEE--------EEEE-------EEEEE-------EEEEEEEE----EEEEE----EEEEE---------EEE---EEEEEEEEEE-HHH--EEEEEEE---------EEEEEEEEEEE--EEEEEEE---E---HHH---
apssp	--EEEEEEEE-------------EEEEEEE-EEEEE------EEEEE-------EEEEE-------EEEEEEEE----EEEEE----EEEEE------EEEE-----EEEEEEEE---HHH-----EEEE---------EEEEEEEEEEE--EEEEEEE-------HHH---	+16.3	+23.7	+0.26
jpred	---EEEEE----------------EEEEE-E------------EE--------EEEEEE-------EEEEEEEE----EEEEE----EEEE------------------------------------EEEE----------EE-----------------------------	-8.1	-10.5	-0.17
phd	-EEEEEE-------------EEEEEEEEEEE----------EEEEEE-------EEEEE------HHHHHHHH------EEE----EEEEEE---------EEE---------EEEEE------EE--EEE----------EEEE--------EEEEEEEE-----EEEEEE	-3.2	+2.7	-0.11
phdpsi	--EEEEEEEE--------------EEEEEEE-----------------------EEEEE--------EEEEEEE----EEEE---EEEEE--------------------HHHHHHHE------------------------------------------------------	-12.3	-25.0	-0.16
prof_king	--EEEEEEEEE---------E---EEEEEE-------------EE--------EEEEEE-------EEEEEEEEE---EEEEE---EEEEEEE------EEE-------------EE----------EEEE----------EEEEE----------EEE---EE--------	-4.4	-1.1	-0.16
profsec	-EEEEEEEEEE-------------EEEEEEE------------EE---------EEEEE--------EEEEEEE----EEEEE--EEEEEE-------EEEE--------HHHHHHHH-----------------------EEE------------EE--------------	-10.6	-11.5	-0.20
psipred	-EEEEEEEEEE-------------EEEEEE--------HH-------------EEEEEE--------EEEEEEE----EEEEE---EEEEE--------------------HHHH-------------------------EE----------------------HHH-----	-12.9	-21.0	-0.24
sspro2	--EEEEEEEEE-------------EEEEEEEE-----------EE---------EEEE---------EEEEEEE----EEEEE----EEEE---------------------EEEE----------EEEEE-------------------------E---HHHHHH------	-10.5	-10.4	-0.20

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 30, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva