EVA results for 1kko:A

DATE : 2002_01_30
TYPE : sec
NRES : 411
HEADER : LYASE
COMPND : 2 MOLECULE: 3-METHYLASPARTATE AMMONIA-LYASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: CITROBACTER AMALONATICUS;
AUTHOR : C.W.LEVY, P.A.BUCKLEY, S.SEDELNIKOVA, Y.KATO, Y.ASANO, D.W.RICE,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41
seq	XKIKQALFTAGYSSFYFDDQQAIKNGAGHDGFIYTGDPVTPGFTSVRQAGECVSVQLILENGAVAVGDCAAVQYSGAGGRDPLFLAEHFIPFLNDHIKPLLEGRDVDAFLPNARFFDKLRIDGNLLHTAVRYGLSQALLDATALASGRLKTEVVCDEWQLPCVPEAIPLFGQSGDDRYIAVDKXILKGVDVLPHALINNVEEKLGFKGEKLREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIGLIFDXDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRXLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHXVQIKTPDLGGIHNIVDAVLYCNKHGXEAYQGGTCNETEISARTCVHVALAARPXRXLIKPGXGFDEGLNIVFNEXNRTIALLQT
dssp	-EEEEEEEEEEEEEEEEE-HHHHH----EE--EE------------EEEEEEEEEEEEE----EEEEEE----------------HHHHHHHHHHH-HHHH---E----HHHHHHHHH-EE--EE--HHHHHHHHHHHHHHHHHHH---HHHHHHHH-----------EE--------HHHHHHHH----EEEE-----HHHHH----HHHHHHHHHHHHHHHHH--------EEEEE---HHHHH----HHHHHHHHHH-HHHH----EEEE-------HHHHHHHHHHHHHHHHHH----EEEE------HHHHHHHHH-----EEEE-HHHH---HHHHHHHHHHHHH--EEEE-------HHHHHHHHHHHHHH---EEE-------HHHHHHHHHHHHHHHHHHH-
apssp	----EEEE------E---HHHHHHH------EEE-----------E-------E-EHHHH---EE----HHHE--------HHHHHHH------------------------HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH---EEEEEE-----------------------EHH--HHHH------------HHHHH----HHHHHHHHHHHHHHHH----------EEEEE---EEEEE----HHHHHHHHHHHHHH-----EE------------HHH-HHHHHHHHHH---EEEEEE------EEEEEE--------EEEE-------EEEEEEE-E-------EE-------EE-EHHHHHHHHH------E-E----------EEEEE----HHH----	-12.7	-12.6	-0.18
jpred	----EEEE----------HHHHHH-------EEE---------EEEEE---EEEEEEEE----EE----EEEEE--------HHHHH-HHHHHHH-----------------HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH---EEEEEE-------------E--------HHHHHHHHHH------HHHHHHHHHHH----HHHHHHHHHHHHHHHHH--------EEEEEE----EEE----HHHHHHHHHHHHHHH----EEE---------HHHHHHHHHHHHHHH-----EEEEE--------EEEEE------EEEEEE--------HHHHHHHHHHH----EE-----------E-EEEEEEE-----HHHH---------EEEEE---HHHHHHH--	-6.8	-1.7	-0.10
phd	-HHHHHHE--------HHHHHHHHH------EEEE---------E-----EEEEEEEEE-----EE--EEEEEE-------HHHHHHHHHHHHHHHHHHHH-----HHH---------EE----HHHHHHHHHHHHHHHHHHHHHH----EEEEEE---------------------EEEEEHHH--------HHHHHHHHHHH----HHHHHHHHHHHHHHHEEE--------EEEEE--EEEEEE---HHHHHHHHHHHHHHH----EEEE----------HHHHHHHHHHHHHHH----EEEEE-----HHHHHHH-------EEEEE--------EEEEEEEEE-----------------EE---EEEEEEE-------E----------EEEEE----EEEE---	-8.7	-7.5	-0.08
phdpsi	--EEEEEE--------HHHHHHHHH------EEEE----------EEE---EEEEEEEEE---EEE---EEEEE-------HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH----EEEEE---------------------HHHHHHHHHHHHHH-HHHHH-HHHHHHHH-----HHHHHHHHHHHHHHH---------EEEEEE-----------HHHHHHHHHHHHHH-----EEEE----------HHHHHHHHHHHHHH-----EEEE-----HHHHHHHHHHH---EEEEEEE-----HHHHHHHHHHHHH---EEEE----------HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHEE--	-1.0	+3.1	-0.03
prof_king	--EEEEEEE-----EEE--HHHHH-------EEEE--------EEEEE---EEEEEEEEE---EEEEEEEEEEE-------HHHHHH-HHHHHHHHHHHHH----H----HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH---EEEEEE------------EEE-----HHHHHHHHHHHHHH------H---HHHE------HHHHHHHHHHHHHHHH--------EEEEEEEEEEH-E----HHHHHHHHHHHHHH-----EEE---------HHHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHH---EEEEEEE------HHHHHHHHHHHH----EEEE----------HHHHHHHHHHH-HHHHHH---------EEEEE-----EEEEE--	-3.3	-0.4	-0.06
profsec	----EEEE----------HHHHHHH------EEEE---------EEE----EEEEEEEEE---EEEE--EEEEE-------HHHHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH----EEEE----------------------HHHHHHHHHHHHHH-HHHHHHH--HHHHH----HHHHHHHHHHHHHHHH---------EEEEEE-----------HHHHHHHHHHHHHHH----EEEE--------HHHHHHHHHHHHHHHH----EEEEE------HHHHHHHHH-----EEEEEE-----HHHHHHHHHHHHH----EEE--------HHHHHHHHHHHHH-HHHHH-------HHHHHEEE----EEEEEE--	-4.6	-0.6	-0.09
psipred	--EEEEEE-----EEEE--HHHHH-------EEEE-----HHHHHHH----EEEEEEEEE---EEEEE---EE--------HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------EEEEE---HHHHHHHHHHHHHHH----HHHHHHHHHHH---HHHHHHHHHHHHHHHHHH--------EEEEE--HHHHHHH---HHHHHHHHHHHHHH----EEEEE--------HHHHHHHHHHHHHHH-------EEE-----HHHHHHHHHH-----EEEEE------HHHHHHHHHHHH------EE-----------EEEEEEEEE-HHHHHH------HHHHHHHHH----EEEEEEE-	-6.1	-4.6	-0.11
sspro2	--EEEEEE------E---HHHHHH-------EEE----------EEE----EEEEEEEE----EEE---EEEEE-------HHHHHHHHHHHHHHH--HHH----HH-----HHHH---EE---HHHHHHHHHHHHHHHHHHHHH----EEEEEE----------EEEEE------HHHHHHHHHH------HHHHHHHHHHH----HHHHHHHHHHHHHHHHEE--------EEEEEEEEEEEEEE---HHHHHHHHHHHHHHH----EEEE--------HHHHHHHHHHHHHHH------EEEE--H------HHE--------EEEEE------HHHHHHHHHHHHH----E--------HHHHHHHHHHHHHH--HHHHH-------HHHHHHHHHHHHHHHHHH--	-4.9	-0.5	-0.10

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 30, 2002
Contact: rost@columbia.edu
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