EVA results for 1jll:B

DATE : 2002_01_30
TYPE : sec
NRES : 388
HEADER : LIGASE
COMPND : 2 MOLECULE: SUCCINYL-COA SYNTHETASE ALPHA SUBUNIT;
SOURCE : 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
AUTHOR : M.E.FRASER

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,...
seq	MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIAINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
dssp	-E--HHHHHHHHHH-------EEEE--HHHHHHHHHHH----EEEEE------------EEEE--HHHHHHHHHHH---EE---------EE---EEEEE---EEEEEEEEEEEE----EEEEEEE------HHHHHHH-HHHEEEEE--------HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH--EEEEEEEEEEEE----EEE---EEEE-HHHHHH-HHHHH---HHH--HHHHHHHHH--EEEE----EEEEE--HHHHHHHHHHHHH----E-EEEE------HHHHHHHHHHHH------EEEEE---------HHHHHHHHHHHH------EEEE-----HHHHHHHHHHH---E-----HHHHHHHHHH-----
apssp	--HHHHHHHHHHHH-------------HHHHHHHHHHH----EEEEE------------EEEE--HHHHHHHHHHH---EE---------EE-EEEEEE-----HHHHHEEEEE-------EEEEE------HHHHHH-----EEEEE--------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH--HHEEE--EEE-----EEEE--HHH----HHHHHHHHHHHH------HHHHHHHH--EEEEE----EEEEE--HHHHHHHHHHHHH----E-EEEEE-----HHHHHHHHHHH--------EEEEE------HHHHHHHHHHHHHHH-----EEE-E-----HHHHHHHHH----EEE---HHHHHHHHHHHHH--	+9.4	+16.0	+0.14
jpred	--HHHHHHHHHHHHH--------E---HHHHHHHHHHH----EEEEEEEE---------EEEE--HHHHHHHHHHHH---EEEE---------EEEEEE--------EEEEEEEE-----EEEEEE------HHHHHH-----EEEEE--------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH--EEEEE--EEE-----EEEEE--------------------------HHHHHHHH----EEE----EEEEE----HHHHHHHHHHH----------------HHHHHHHHHHH------EEEEEEE------HHHHHHHHHHHHHH-----EEEEEE----HHHHHHHHHH----EEE---HHHHHHHHHHHH---	+5.7	+11.2	+0.14
phd	--HHHHHHHHHHHHH------------HHHHHHHHHHH----EEEEEEEE---------EEEE---HHHHHHHHHHH--EEEEEEE------HHHHHHHHHHHHHHHHH-EEEEE----EEEEEEE----EEEEEE------EEEEEEE---------HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH--EEEE----EEEE----------------HHHHHHHH---HHHHHHHHHHHHHHHE---EEEEE-----E-----EEE--------E--------HHHHHHHHHHHHH----EEEEEE-------EEEHHHH--EEEEEEE-EEEEEEEE----HHHHHHHHHH--HHHHHHH-HHHHHHHHHHHH---	-3.8	+3.5	-0.06
phdpsi	---HHHHHHHHHHH-------------HHHHHHHHHH----EEEEEEEE------------EE--HHHHHHHHHHHH----EEE---------EEEEEEEE---EEEEEEEEEEE-----EEEEEE-----EEHHH-----HHHEEEE--------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH---EEEEE--EEEE---EEEEEE-EE-----HHHHHHHHHH--------HHHHHHHH---EEEE---EEEEEE--HHHHHHHHHHHHHH---------------HHHHHHHHHHHH-----EEEEEE----HHHHHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHH----EEE--HHHHHHHHHHHHH---	+7.1	+12.4	+0.17
prof_king	----HHHHHHHHHH--------EEE--HHHHHHHHHHH----EEEEEE--------EEEEEE---HHHHHHHHHHHH---EEEE---------EEEEEEE------EEEEEEEEE-----EEEEEE-----EEEEHHH----EEEEEE--------HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH---EEEEE--EEEE----EEEEEEEEE----------------------HHHHHHHH---EEEEE---EEEEE----HHHHHHHHHHH------EEEE------HHHHHHHHHHH------EEEEEEE------HHHHHHHHHHHHHHH--EEEEEEEE----HHHHHHHHHH----EEEE--HHHHHHHHHHHH---	+6.6	+12.5	+0.15
profsec	----HHHHHHHHHH-------------HHHHHHHHHHH----EEEEEEEE---------EEEE--HHHHHHHHHHHH---------------EEEEEEEEE----EEEEEEEEEE-----EEEEEE-----EEHHHH-------EEEE--------HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH---EEEEE--EEEE----EEEEEEEEEE--------HHHHHH-------HHHHHHHH---EEEEE---EEEEE--HHHHHHHHHHHHHH---------------HHHHHHHHHHHH------EEEEEE---HHHHHHHHHHHHHHHHHH-----EEEEE----HHHHHHHHHH----EEE---HHHHHHHHHHHH---	+6.2	+7.7	+0.16
psipred	----HHHHHHHHHH--------EEE--HHHHHHHHHHH----EEEEE-HH--------EEEEE--HHHHHHHHHHHH-----------------EEEEE------EEEEEEEEE-----EEEEEEE------HHHHHHH----EEEEE--HHH---HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH---EEEEE--EEE-----EEEEEEEEEE---------------------HHHHHHHHH---EE-----EEEEE--HHHHHHHHHHHHH-------EEE------HHHHHHHHHHHH------EEEEEE------HHHHHHHHHHHHHH------EEEEE----HHHHHHHHHH----EEEE--HHHHHHHHHHHH---	+8.3	+6.9	+0.18
sspro2	---HHHHHHHHHHH--------EEE--HHHHHHHHHHH----EEEE--EE--------EEEEE--HHHHHHHHHHHHH---EE---------E-EEEEE-------EEEEEEEE-------EEEEE-----EHHHHHHH-HHHHEE-E--------HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH---EEEEE--EEE-----EEEEEEEEEE--------HHHHHH-------HHHHHHHH----EEE----EEEEE--HHHHHHHHHHHHH----------------HHHHHHHHHHHH------EEEEEE------HHHHHHHHHHHHHH-----EEEEEE----HHHHHHHHHH----EEE---HHHHHHHHHHHH---	+5.8	+8.2	+0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 30, 2002
Contact: rost@columbia.edu
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