EVA results for 1jkj:B

DATE : 2002_01_30
TYPE : sec
NRES : 388
HEADER : LIGASE
COMPND : 2 MOLECULE: SUCCINYL-COA SYNTHETASE ALPHA SUBUNIT;
SOURCE : 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
AUTHOR : M.E.FRASER

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,...
seq	MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
dssp	-E--HHHHHHHHHH-------EEEE--HHHHHHHHHHH----EEEEE------------EEEE--HHHHHHHHHHH---EE---------EE---EEEEE---EEEEEEEEEEEE----EEEEEEE------HHHHHHH-HHHEEEEE--------HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH--EEEEEEEEEEEE----EEE---EEEE-HHHHHH-HHHHH---HHH--HHHHHHHH---EEEE----EEEEE--HHHHHHHHHHHHH----E-EEEE------HHHHHHHHHHHH------EEEEEEE-----HHHHHHHHHHHHHH------EEEEEE---HHHHHHHHH-----EEE---HHHHHHHHHH-----
apssp	--HHHHHHHHHHHH-------------HHHHHHHHHHH----EEEEE------------EEEE--HHHHHHHHHHH---EE---------EE--EEEEE-----HHHHHH--EE------EEEEEE------HHHHHH-----EEEEE--------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH----EEE--EEE-----EEEE--HHH----HHHHHHHHHHHHH-----HHHHHHHH--EEEEE----EEEEE--HHHHHHHHHHHHH----E-EEEEE-----HHHHHHHHHHH--------EEEEE------HHHHHHHHHHHHHHH-----EEE-E-----HHHHHHHHH----EEE---HHHHHHHHHHHHH--	+10.1	+14.4	+0.17
phd	--HHHHHHHHHHHHH------------HHHHHHHHHHH----EEEEEEEE---------EEEE---HHHHHHHHHHH--EEEEEEE------HHHHHHHHHHHHHHHHH-EEEEE----EEEEEEE----EEEEEE------EEEEEEE----------HHHHHHHH----HHHHHHHHHHHHHHHHHHHH--EEEE---EEEE----EEEE----------------HHHHHHHH---HHHHHHHHHHHHHHH----EEEEE-----E-----EEE--------E--------HHHHHHHHHHHHH----EEEEEE-------EEEHHHH--EEEEEEE-EEEEEEEE----HHHHHHHHHH--HHHHHH--HHHHHHHHHHHH---	-3.0	+2.8	-0.04
phdpsi	----HHHHHHHHHH-------------HHHHHHHHHH-----EEEEEEE-----------EE---HHHHHHHHHHHH---EEEE--------EEEEEEEEE---EEEEEEEEEEE-----EEEEEE-----EEHHH--------EEEE--------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH---EEEEE--EEEE---EEEEEEEEE----HHHHHHHHHHH--------HHHHHHHH---EEEE---EEEEEE--HHHHHHHHHHHHHH---------------HHHHHHHHHHHH-----EEEEEE----HHHHHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHH----EEE--HHHHHHHHHHHHH---	+7.9	+12.4	+0.20
prof_king	----HHHHHHHHHH--------EEE--HHHHHHHHHHH----EEEEEE--------EEEEEE---HHHHHHHHHHHH---EEEE--------EEEEEEEE-----EEEEEEEEEE-----EEEEEE-----EEEEHHH----EEEEEE--------HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH---EEEEE--EEEE----EEEEEEEEEE---------------------HHHHHHHH---EEEEE---EEEEE----HHHHHHHHHHH------EEEE------HHHHHHHHHHHH-----EEEEEEE------HHHHHHHHHHHHHHH--EEEEEEEE----HHHHHHHHHH----EEEE--HHHHHHHHHHHH---	+8.4	+13.3	+0.18
profsec	----HHHHHHHHHH-------------HHHHHHHHHHH----EEEEEEEE--------EEEEE--HHHHHHHHHHHH---------------EEEEEEEE-----EEEEEEEEEE-----EEEEEE-----EEHHHH------EEEEE--------HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH---EEEEE--EEEE----EEEEEEEEEE--------HHHHHH-------HHHHHHHH---EEEEE---EEEEE--HHHHHHHHHHHHHH---------------HHHHHHHHHHHH------EEEEEE---HHHHHHHHHHHHHHHHHH-----EEEEE----HHHHHHHHHH----EEE---HHHHHHHHHHHH---	+7.8	+9.0	+0.19
psipred	----HHHHHHHHHH--------EEE--HHHHHHHHHHH----EEEEE-HH--------EEEEE--HHHHHHHHHHHH-----------------EEEEE------EEEEEEEEE------EEEEEE------HHHHHHH----EEEEE--HHH---HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH---EEEEE--EEE-----EEEEEEEEEE---------------------HHHHHHHHH---EE-----EEEEE--HHHHHHHHHHHHH-------EEE------HHHHHHHHHHHH------EEEEEE------HHHHHHHHHHHHHH------EEEEE----HHHHHHHHHH----EEEE--HHHHHHHHHHHH---	+8.8	+7.4	+0.19
sspro2	---HHHHHHHHHHH--------EEE--HHHHHHHHHHH----EEEE--EE--------EEEEE--HHHHHHHHHHHH---EEEE--------E-EEEEE-------EEEEEEEE-------EEEEE-----EHHHHHHH-HHHHEE-E--------HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH---EEEEE--EEE-----EEEEEEEEEE-----H--HHHHHH-------HHHHHHHH----EEE----EEEEE--HHHHHHHHHHHHH----------------HHHHHHHHHHHH------EEEEEE------HHHHHHHHHHHHHH-----EEEEEE----HHHHHHHHHH----EEE---HHHHHHHHHHHH---	+7.6	+9.3	+0.19

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 30, 2002
Contact: rost@columbia.edu
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