EVA: Detailed information for proteins added on: 2001_08_29

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2001_08_29	1e89	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	MOLECULE: HYDROXYNITRILE LYASE; CHAIN: A, B; SYNONYM: (S)-ACETONE-CYANOHYDRIN LYASE, (S)-HYDROXYNITRILASE; EC: 4.2.1.37; ENGINEERED: YES; MUTATION: YES	MANIHOT ESCULENTA; CASSAVA;	H.LAUBLE,B.MIEHLICH,S.FOERSTER,H.WAJANT,F.EFFENBERGER
2001_08_29	1fg3	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: HISTIDINOL PHOSPHATE AMINOTRANSFERASE; CHAIN: A; SYNONYM: IMIDAZOLE ACETOL-PHOSPHATE TRANSAMINASE; EC: 2.6.1.9; ENGINEERED: YES	ESCHERCHIA COLI; BACTERIA;	J.SIVARAMAN,M.CYGLER
2001_08_29	1g2r	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL GENOMICS, UNKNOWN FUNCTION	MOLECULE: HYPOTHETICAL CYTOSOLIC PROTEIN; CHAIN: A; ENGINEERED: YES	STREPTOCOCCUS PNEUMONIAE; BACTERIA;	J.OSIPIUK,P.GORNICKI,L.MAJ,A.JOACHIMIAK
2001_08_29	1hy9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	MOLECULE: COCAINE AND AMPHETAMINE REGULATED TRANSCRIPT PROTEIN; CHAIN: A; FRAGMENT: C-TERMINAL DOMAIN (RESIDUES 76-116); ENGINEERED: YES	HOMO SAPIENS; HUMAN; ORGAN: BRAIN;	S.LUDVIGSEN,L.THIM,A.M.BLOM,B.S.WULFF
2001_08_29	1i42	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	PROTEIN BINDING	MOLECULE: P47; CHAIN: A; FRAGMENT: C-TERMINAL DOMAIN(RESIDUES 282-370); ENGINEERED: YES	RATTUS NORVEGICUS; RAT;	X.YUAN,A.SHAW,X.ZHANG,H.KONDO,J.LALLY,P.S.FREEMONT, S.MATTHEWS
2001_08_29	1i7c	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	MOLECULE: S-ADENOSYLMETHIONINE DECARBOXYLASE BETA CHAIN; CHAIN: B; EC: 4.1.1.50; ENGINEERED: YES; MOLECULE: S-ADENOSYLMETHIONINE DECARBOXYLASE ALPHA CHAIN; CHAIN: A; EC: 4.1.1.50; ENGINEERED: YES	HOMO SAPIENS; HUMAN; HOMO SAPIENS; HUMAN;	W.D.TOLBERT,J.L.EKSTROM,I.I.MATHEWS,J.A.SECRIST III, A.E.PEGG,S.E.EALICK
2001_08_29	1i7m	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	MOLECULE: S-ADENOSYLMETHIONINE DECARBOXYLASE BETA CHAIN; CHAIN: B, D; EC: 4.1.1.50; ENGINEERED: YES; MOLECULE: S-ADENOSYLMETHIONINE DECARBOXYLASE ALPHA CHAIN; CHAIN: A, C; EC: 4.1.1.50; ENGINEERED: YES	HOMO SAPIENS; HUMAN; HOMO SAPIENS; HUMAN;	W.D.TOLBERT,J.L.EKSTROM,I.I.MATHEWS,J.A.SECRIST III, A.E.PEGG,S.E.EALICK
2001_08_29	1je5	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	DNA BINDING PROTEIN	MOLECULE: HELIX-DESTABILIZING PROTEIN; CHAIN: A, B; SYNONYM: GP2.5, SINGLE-STRANDED DNA-BINDING PROTEIN, SSB PROTEIN; ENGINEERED: YES	BACTERIOPHAGE T7; VIRUS;	T.HOLLIS,J.M.STATTEL,D.S.WALTHER,C.C.RICHARDSON, T.E.ELLENBERGER
2001_08_29	1jjd	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	METAL BINDING PROTEIN	MOLECULE: METALLOTHIONEIN; CHAIN: A; SYNONYM: SMTA; ENGINEERED: YES	SYNECHOCOCCUS SP.; BACTERIA; STRAIN: PCC 7942; GENE: SMTA;	P.J.SADLER,N.J.ROBINSON
2001_08_29	1jjy	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	MOLECULE: CARBON MONOXIDE DEHYDROGENASE SUBUNIT COOS; CHAIN: A; EC: 1.2.99.2	CARBOXYDOTHERMUS HYDROGENOFORMANS; BACTERIA	H.DOBBEK,V.SVETLITCHNYI,L.GREMER,R.HUBER,O.MEYER
2001_08_29	1job	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	MOLECULE: OLFACTORY MARKER PROTEIN; CHAIN: A; ENGINEERED: YES	MUS MUSCULUS; MOUSE; GENE: OMP;	P.SMITH,J.F.HUNT
2001_08_29	1jod	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	MOLECULE: OLFACTORY MARKER PROTEIN; CHAIN: A, B; ENGINEERED: YES	MUS MUSCULUS; MOUSE;	P.SMITH,J.F.HUNT
2001_08_29	1jru	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	UNKNOWN FUNCTION	MOLECULE: P47 PROTEIN; CHAIN: A; FRAGMENT: C-TERMINAL DOMAIN (RESIDUES 282-370); SYNONYM: XY40 PROTEIN; ENGINEERED: YES	RATTUS NORVEGICUS; RAT;	X.M.YUAN,A.SHAW,X.D.ZHANG,H.KONDO,J.LALLY,P.S.FREEMONT, S.J.MATTHEWS

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field