EVA results for 1jc7:A

DATE : 2001_08_08
TYPE : sec
NRES : 129
HEADER : CELL ADHESION
COMPND : 2 MOLECULE: AGRIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS;
AUTHOR : J.STETEFELD

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....
seq	CPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVNPAPQYMWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKL
dssp	-----HHHHHH---EEEEEEEEEEEEEE----EEEEEEEEEEEEE-HHHHHHH---E---EEEEEEE--------------EEEEEEEE--HHH-------EEEEEEEE---HHHHHHHHHHHHHH---
jpred	---HHHH------EEEEE--EEEEEE--------EEEEEEEEEE----EEEEEEEE----EEEEE-----EEE---------EEEEE-------------HHHH---HHHHHHH--HHHHHHHH-----	-14.4	-14.1	-0.20
phd	--HHHHHHHHH---EEEEEEEEEEEEE----EEEEEEEEEEEEEE---EEEEEEE-----EEEEEE----EEEE--E----EEEEEE---------HHHHHEE-HHHHHHHHHH--HHHHHHHHHH---	-3.6	-8.1	-0.03
phdpsi	--HHHHHHHHH---EEEEEEEEEEEE--------EEEEEEEEE----EEEEEEEEE----EEEEEE-----E--------EEEEEEE---------HHHHHEE-HHHHHHHHHH--HHHHHHHHHH---	-8.0	-3.5	-0.08
profsec	--HHHHHHHHHH--EEEE--EEEEEE--------EEEEEEEEE----EEEEEEEEE----EEEEEE-----EE--------EEEEEE--------HHHH-HHHH--HHHHHHHH-HHHHHHHHHHHH--	-14.3	-15.9	-0.18
psipred	--HHHHHHHHHH--EEEEE-HHHHH-------EEEEEEEEEEEE----HHHHHHHH----EEEE-----EEEE--------EEEEEE-------------EEEE----HHHHHHHHHHHHHHHHH----	-8.8	-2.7	-0.09
pssp	----HHHHHHHH-EEEEEEEEEEEEEE----EEEEEEE-EEHHHH----EEEEEE-----EEEEEEE---EEEEE-------EEEEE------------HHHHHHHHHHHHHHHH-HHHHHHHHHHHH-	+0.7	-2.2	+0.01
samt99_sec	-HHHHHHHHHHHH-EEEE--HHHHH-------EEEEEEEEEEEH----EEHHHHE-----EEEEE------E----------EEEEE-----------HHHHHHHHHHHHHHHH-HHHHHHHH------	-16.1	-13.7	-0.16
sspro2	--HHHHHHHHHHH-EEEE--HHHHH--------E-EEEEEEEEE----EEEEEEEE----EEEEE------EE--------EEEEEE-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH---	-16.9	-16.4	-0.22

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 1, 2001
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva