EVA: Detailed information for proteins added on: 2001_06_06

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2001_06_06	1e32	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ATPASE	MOLECULE: P97; CHAIN: A; FRAGMENT: N TERMINAL DOMAIN AND D1 AAA DOMAIN, RESIDUES 1-458; ENGINEERED: YES	MUS MUSCULUS; HOUSE MOUSE;	X.ZHANG,A.SHAW,P.A.BATES,M.A.GORMAN,H.KONDO,P.DOKURNO,G.LEONARD, M.J.E.STERNBERG,P.S.FREEMONT
2001_06_06	1f3y	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: DIADENOSINE 5',5'''-P1,P4-TETRAPHOSPHATE HYDROLASE; CHAIN: A; FRAGMENT: RESIDUES 35-199; EC: 3.6.1.17; ENGINEERED: YES; MUTATION: YES	LUPINUS ANGUSTIFOLIUS; NARROW-LEAVED BLUE LUPINE;	J.D.SWARBRICK,T.BASHTANNYK,D.MAKSEL,X.R.ZHANG,G.M.BLACKBURN, K.R.GAYLER,P.R.GOOLEY
2001_06_06	1hf9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ATPASE INHIBITOR	MOLECULE: ATPASE INHIBITOR (MITOCHONDRIAL); SYNONYM: IF1; CHAIN: A, B; FRAGMENT: C-TERMINAL DOMAIN (44-84); ENGINEERED: YES	BOS TAURUS; COW; ORGAN: HEART; ORGANELLE: MITOCHONDRIA;	D.J.GORDON-SMITH,R.J.CARBAJO,J.-C.YANG,H.VIDELER, M.J.RUNSWICK,J.E.WALKER,D.NEUHAUS
2001_06_06	1hh0	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	VIRUS COAT PROTEIN	MOLECULE: PH75 INOVIRUS MAJOR COAT PROTEIN; CHAIN: A; SYNONYM: PH75 BACTERIOPHAGE MAJOR COAT PROTEIN; OTHER_DETAILS: MAJOR COAT PROTEIN ASSEMBLY	BACTERIOPHAGE PH75; INOVIRUS PH75; OTHER_DETAILS: GROWN IN THERMUS THERMOPHILUS	D.M.PEDERSON,L.C.WELSH,D.A.MARVIN,M.SAMPSON,R.N.PERHAM, M.YU,M.R.SLATER
2001_06_06	1i74	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: PROBABLE MANGANESE-DEPENDENT INORGANIC PYROPHOSPHATASE; CHAIN: A, B; SYNONYM: PYROPHOSPHATE PHOSPHO-HYDROLASE, PPASE; EC: 3.6.1.1; ENGINEERED: YES	STREPTOCOCCUS MUTANS; BACTERIA;	M.C.MERCKEL,I.P.FABRICHNIY,A.GOLDMAN,R.LAHTI,A.SALMINEN
2001_06_06	1ia9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: TRANSIENT RECEPTOR POTENTIAL-RELATED PROTEIN; CHAIN: A, B; FRAGMENT: PROTEIN KINASE DOMAIN, RESIDUES 1549-1828; SYNONYM: TRP-RELATED; EC: 2.7.1.37; ENGINEERED: YES	MUS MUSCULUS; MOUSE; GENE: CHAK;	H.YAMAGUCHI,M.MATSUSHITA,A.C.NAIRN,J.KURIYAN
2001_06_06	1iaj	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: TRANSIENT RECEPTOR POTENTIAL-RELATED PROTEIN; CHAIN: A, B; FRAGMENT: PROTEIN KINASE DOMAIN, RESIDUES 1549-1828; SYNONYM: TRP-RELATED; EC: 2.7.1.37; ENGINEERED: YES	MUS MUSCULUS; MOUSE; GENE: CHAK;	H.YAMAGUCHI,M.MATSUSHITA,A.C.NAIRN,J.KURIYAN
2001_06_06	1im3	D	pdb_ascii	dssp	fasta	psi_ascii	psi_html	IMMUNE SYSTEM/VIRUS/VIRAL PROTEIN	MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN; CHAIN: A, E, I, M; FRAGMENT: EXTRACELLULAR DOMAIN, HEAVY CHAIN; ENGINEERED: YES; MOLECULE: BETA-2-MICROGLOBULIN; CHAIN: B, F, J, N; FRAGMENT: RECOMBINANT RESIDUES 1-99; ENGINEERED: YES; MOLECULE: HUMAN T-CELL LYMPHOTROPIC VIRUS TYPE 1 TAX PEPTIDE; CHAIN: C, G, K, O; ENGINEERED: YES; MOLECULE: CYTOMEGALOVIRUS PROTEIN US2; CHAIN: D, H, L, P; FRAGMENT: RECOMBINANT ER-LUMENAL FRAGMENT; ENGINEERED: YES	HOMO SAPIENS; HUMAN; GENE: HLA-A2; HOMO SAPIENS; HUMAN; GENE: BETA 2-MICROGLOBULIN; SYNTHETIC: YES; OTHER_DETAILS: HTLV TAX PEPTIDE (LLFGYPVYV) WAS PRODUCED BY FMOC SOLID PHASE PEPTIDE SYNTHESIS; HUMAN CYTOMEGALOVIRUS; GENE: US2;	B.E.GEWURZ,R.GAUDET,D.TORTORELLA,E.W.WANG,H.L.PLOEGH, D.C.WILEY

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field