EVA: Detailed information for proteins added on: 2001_01_17

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2001_01_17	1ep1	B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	MOLECULE: DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT); CHAIN: A; EC: 1.3.3.1; ENGINEERED: YES; MOLECULE: DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT); CHAIN: B; EC: 1.3.3.1; ENGINEERED: YES	LACTOCOCCUS LACTIS; LACTOCOCCUS LACTIS;	P.ROWLAND,S.NORAGER,K.F.JENSEN,S.LARSEN
2001_01_17	1es8	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: RESTRICTION ENDONUCLEASE BGLII; CHAIN: A; EC: 3.2.21.-; ENGINEERED: YES	BACILLUS SUBTILIS; BACTERIA;	C.M.LUKACS,A.K.AGGARWAL
2001_01_17	1fh1	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LIPID BINDING PROTEIN	MOLECULE: NODULATION PROTEIN F; CHAIN: A; SYNONYM: NODF; ENGINEERED: YES	RHIZOBIUM LEGUMINOSARUM; BACTERIA;	C.A.FOWLER,F.TIAN,H.M.AL-HASHIMI,J.H.PRESTEGARD
2001_01_17	1fm0	D-E	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: MOLYBDOPTERIN CONVERTIN FACTOR, SUBUNIT 1; CHAIN: D; ENGINEERED: YES; MOLECULE: MOLYBDOPTERIN CONVERTIN FACTOR, SUBUNIT 2; CHAIN: E; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA; ESCHERICHIA COLI; BACTERIA;	M.J.RUDOLPH,M.M.WUEBBENS,K.V.RAJAGOLPALAN,H.SCHINDELIN
2001_01_17	1foe	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN, IMMUNE SYSTEM/SIGNALI	MOLECULE: T-LYMPHOMA INVASION AND METASTASIS INDUCING PROTEIN 1; CHAIN: A, C, E, G; FRAGMENT: RESIDUES 1033 TO 1406 FROM MURINE T-LYMPHOMA INVASION AND METASTASIS FACTOR 1, PLECKSTRIN HOMOLOGY DOMAIN; SYNONYM: TIAM1 PROTEIN, T-CELL LYMPHOMA INVASION AND METASTASIS 1; ENGINEERED: YES; MUTATION: YES; OTHER_DETAILS: ALA-MET-GLY CLONING ARTIFACT ADDED TO N- TERMINUS; MOLECULE: RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE; CHAIN: B, D, F, H; FRAGMENT: RESIDUES 1 TO 177 FROM HUMAN RAC1; SYNONYM: P21-RAC1, RAS-LIKE PROTEIN TC25, RAC1 P21(SMALL) GTP-BINDING PROTEIN; ENGINEERED: YES	MUS MUSCULUS; MOUSE; HOMO SAPIENS; HUMAN;	D.K.WORTHYLAKE,K.L.ROSSMAN,J.SONDEK
2001_01_17	1fzr	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: ENDONUCLEASE I; CHAIN: A, B, C, D; FRAGMENT: RESIDUES 12-149; SYNONYM: ENDODEOXYRIBONUCLEASE I; EC: 3.1.21.2; ENGINEERED: YES; MUTATION: YES	BACTERIOPHAGE T7;	J.M.HADDEN,M.A.CONVERY,A.C.DECLAIS,D.M.J.LILLEY, S.E.V.PHILLIPS
2001_01_17	1g55	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: DNA CYTOSINE METHYLTRANSFERASE DNMT2; CHAIN: A; EC: 2.1.1.37; ENGINEERED: YES; MUTATION: YES	HOMO SAPIENS; HUMAN;	A.DONG,J.A.YODER,X.ZHANG,L.ZHOU,T.H.BESTOR,X.CHENG

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field